RNA–Protein interactions for RNA: ENST00000338932.7

SPTBN4-201, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-201ENST00000338932 FOXN3O00409 490 aaPredicted RBP20.23■□□□□ 0.83
SPTBN4-201ENST00000338932 HLA-DQA1Q5Y7H0 255 aa20.23■□□□□ 0.83
SPTBN4-201ENST00000338932 COLGALT1Q8NBJ5 622 aa20.23■□□□□ 0.83
SPTBN4-201ENST00000338932 TMEM176AQ96HP8 235 aa20.23■□□□□ 0.83
SPTBN4-201ENST00000338932 GSDMCQ9BYG8 508 aa20.23■□□□□ 0.83
SPTBN4-201ENST00000338932 ATMINO43313 823 aaPredicted RBP20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 WDR48Q8TAF3 677 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 LMTK2Q8IWU2 1503 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 LSM1O15116 133 aaKnown RBP20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 SREBF1P36956 1147 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 MYBPC3Q14896 1274 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 HEXDCQ8WVB3 486 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 GJB4Q9NTQ9 266 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 PCDHGA10Q9Y5H3 936 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 FRMPD4Q14CM0 1322 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 CPSF4O95639 269 aaKnown RBP20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 PRDX5P30044 214 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 ERVK-24P63145 666 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 MAPKAPK3Q16644 382 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 ERICH5Q6P6B1 374 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 ADAMTSL2Q86TH1 951 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 UMODL1Q5DID0 1318 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 NKRFO15226 690 aaKnown RBP eCLIP20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 OMPP47874 163 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 USP45Q70EL2 814 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 TBL1YQ9BQ87 522 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 CDK9P50750 372 aaKnown RBP20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 OFCC1Q8IZS5 231 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 ITCHQ96J02 903 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 KLF6Q99612 283 aaPredicted RBP20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 ICAM1P05362 532 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 PRKAR2AP13861 404 aaKnown RBP20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 GLRBP48167 497 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 CCDC24Q8N4L8 307 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 TMEM143Q96AN5 459 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 PLA2G4CQ9UP65 541 aa20.22■□□□□ 0.83
SPTBN4-201ENST00000338932 TRIM38O00635 465 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 PEPDP12955 493 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 ADCY4Q8NFM4 1077 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 MAGEE2Q8TD90 523 aaPredicted RBP20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 TATDN2Q93075 761 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 TDRD1Q9BXT4 1180 aaKnown RBP20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 UXTQ9UBK9 157 aaPredicted RBP20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 HPSEQ9Y251 543 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 ANPEPP15144 967 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 PRKG2Q13237 762 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 ABRAQ8N0Z2 381 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 PNMA8BQ9ULN7 279 aaPredicted RBP20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 MRPS22P82650 360 aaKnown RBP20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 SLC28A1O00337 649 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 ORC5O43913 435 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 TULP3O75386 442 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 BTBD9Q96Q07 612 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 MTA2O94776 668 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 EIF4BP23588 611 aaKnown RBP20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 RPL26P61254 145 aaKnown RBP20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 CSHL1Q14406 222 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 VN1R5Q7Z5H4 357 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 PACS2Q86VP3 889 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 PLCZ1Q86YW0 608 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 HGH1Q9BTY7 390 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 ABCB10Q9NRK6 738 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 PLOD3O60568 738 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 ISCA1Q9BUE6 129 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 CRB1P82279 1406 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 CDC40O60508 579 aaKnown RBP eCLIP20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 CLCN5P51795 746 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 TCAIMQ8N3R3 496 aa20.21■□□□□ 0.83
SPTBN4-201ENST00000338932 GLI1P08151 1106 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 USP46P62068 366 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 ATG14Q6ZNE5 492 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 MRPS31Q92665 395 aaKnown RBP20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 SHCBP1LQ9BZQ2 653 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 KCNH7Q9NS40 1196 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 CDK5RAP2Q96SN8 1893 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 SMNDC1O75940 238 aaKnown RBP eCLIP20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 PRDX6P30041 224 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 GPR1P46091 355 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 WDR37Q9Y2I8 494 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 PEX16Q9Y5Y5 336 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 CAPN6Q9Y6Q1 641 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 AXLP30530 894 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 BMT2Q1RMZ1 405 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 SUN5Q8TC36 379 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 RAB2BQ8WUD1 216 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 MRTO4Q9UKD2 239 aaKnown RBP20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 SRP54P61011 504 aaKnown RBP20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 DDX39BQ13838 428 aaKnown RBP20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 POLNQ7Z5Q5 900 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 MED28Q9H204 178 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 RAMP2O60895 175 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 IFNA7P01567 189 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 SLC6A2P23975 617 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 GRIA3P42263 894 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 C10orf107Q8IVU9 208 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 CRAMP1Q96RY5 1269 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 ACOX2Q99424 681 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 HMGXB4Q9UGU5 601 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 NUP205Q92621 2012 aa20.2■□□□□ 0.82
SPTBN4-201ENST00000338932 CAMK1Q14012 370 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms