RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CYP4B1P13584 511 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 CRABP2P29373 138 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 NEK3P51956 506 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 USP46P62068 366 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 SPIBQ01892 262 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 TBC1D3GQ6DHY5 549 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 TBC1D3CQ6IPX1 549 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 MZT2AQ6P582 158 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 ATG14Q6ZNE5 492 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 TBC1D3Q8IZP1 549 aaPredicted RBP11.91□□□□□ -0.5
SHANK2-201ENST00000338508 TCP10LQ8TDR4 215 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 HTR3CQ8WXA8 447 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 FEM1CQ96JP0 617 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 FBXO6Q9NRD1 293 aaPredicted RBP11.91□□□□□ -0.5
SHANK2-201ENST00000338508 CLN6Q9NWW5 311 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 OSER1Q9NX31 292 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 ITGA11Q9UKX5 1188 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 BTRCQ9Y297 605 aa11.91□□□□□ -0.5
SHANK2-201ENST00000338508 ZMPSTE24O75844 475 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 GIMD1P0DJR0 217 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 BMP7P18075 431 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 ARL3P36405 182 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 WASP42768 502 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 IRF8Q02556 426 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 RGS1Q08116 209 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 WDR93Q6P2C0 686 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 OFCC1Q8IZS5 231 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 DEFB106AQ8N104 65 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 LNX2Q8N448 690 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 ALLCQ8N6M5 410 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 ACTL9Q8TC94 416 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 GOLGA4Q13439 2230 aaKnown RBP11.9□□□□□ -0.5
SHANK2-201ENST00000338508 CLASP1Q7Z460 1538 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 OR6K2Q8NGY2 324 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 CIDEBQ9UHD4 219 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 ZBTB11O95625 1053 aaPredicted RBP11.9□□□□□ -0.5
SHANK2-201ENST00000338508 GALK1P51570 392 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 SPANXN3Q5MJ09 141 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 SDHAF4Q5VUM1 108 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 PYDC1Q8WXC3 89 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 MARCH2Q9P0N8 246 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 KPNA4O00629 521 aaPredicted RBP11.9□□□□□ -0.5
SHANK2-201ENST00000338508 SGTAO43765 313 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 DBTP11182 482 aaKnown RBP11.9□□□□□ -0.5
SHANK2-201ENST00000338508 SBK1Q52WX2 424 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 CCDC54Q8NEL0 328 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 IKZF3Q9UKT9 509 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 HECW2Q9P2P5 1572 aa11.9□□□□□ -0.5
SHANK2-201ENST00000338508 PEX11AO75192 247 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 MATN4O95460 622 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 RPS12P25398 132 aaKnown RBP11.9□□□□□ -0.51
SHANK2-201ENST00000338508 MRPS22P82650 360 aaKnown RBP11.9□□□□□ -0.51
SHANK2-201ENST00000338508 ZNF846Q147U1 533 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 SMCO1Q147U7 214 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.51
SHANK2-201ENST00000338508 SLC5A5Q92911 643 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 SPATC1LQ9H0A9 340 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 C17orf75Q9HAS0 396 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 ABCB10Q9NRK6 738 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 NAALADL1Q9UQQ1 740 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 NRKQ7Z2Y5 1582 aa11.9□□□□□ -0.51
SHANK2-201ENST00000338508 HMGCRP04035 888 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 GALNT3Q14435 633 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 CPNE1Q99829 537 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 HMG20AQ9NP66 347 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 ADM5C9JUS6 153 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 CAMTA2O94983 1202 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 PURAQ00577 322 aaKnown RBP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 GRB10Q13322 594 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 GFOD2Q3B7J2 385 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 PRMT9Q6P2P2 845 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 NPNTQ6UXI9 565 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 GAD1Q99259 594 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 TMPRSS4Q9NRS4 437 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 UBE2QL1A1L167 161 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 OR10H3O60404 316 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 HDCP19113 662 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 ADCYAP1R1P41586 468 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 PLPP4Q5VZY2 271 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 GET4Q7L5D6 327 aaPredicted RBP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 NKD1Q969G9 470 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 MAGEB16A2A368 324 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 CCDC182A6NF36 153 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 FCHO1O14526 889 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 TPP1O14773 563 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 ATP13A4Q4VNC1 1196 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 EXOC3L1Q86VI1 746 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 NAT9Q9BTE0 207 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 FRMD8P1Q9BZ68 369 aaPredicted RBP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 IMP3Q9NV31 184 aaKnown RBP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 INTS7Q9NVH2 962 aaKnown RBP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 PHF24Q9UPV7 400 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 DGKAP23743 735 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 CDC25CP30307 473 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 ELAVL2Q12926 359 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms