RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 MMADHCQ9H3L0 296 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-201ENST00000334133 FIS1Q9Y3D6 152 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 J3KR12 359 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 KPNA6O60684 536 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 MAGEC1O60732 1142 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 GJB3O75712 270 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 CNTN5O94779 1100 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 JUNP05412 331 aaKnown RBP19.2■□□□□ 0.66
RFTN1-201ENST00000334133 CCNCP24863 283 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 RAP1GDS1P52306 607 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 COPAP53621 1224 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 DSC3Q14574 896 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 RPS27LQ71UM5 84 aaKnown RBP19.2■□□□□ 0.66
RFTN1-201ENST00000334133 LDB1Q86U70 411 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-201ENST00000334133 RTN4RL1Q86UN2 441 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-201ENST00000334133 FSTL5Q8N475 847 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-201ENST00000334133 ATAD1Q8NBU5 361 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 NUF2Q9BZD4 464 aa19.2■□□□□ 0.66
RFTN1-201ENST00000334133 AAR2Q9Y312 384 aaKnown RBP19.2■□□□□ 0.66
RFTN1-201ENST00000334133 NEMP2A6NFY4 417 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 SEPT4O43236 478 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 VHLP40337 213 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 SLC1A2P43004 574 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 LRRC36Q1X8D7 754 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 ARL13AQ5H913 290 aaPredicted RBP19.19■□□□□ 0.66
RFTN1-201ENST00000334133 PCID2Q5JVF3 399 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 TCHHL1Q5QJ38 904 aaPredicted RBP19.19■□□□□ 0.66
RFTN1-201ENST00000334133 PIK3R6Q5UE93 754 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 TMEM198Q66K66 360 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 KBTBD2Q8IY47 623 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 CENPLQ8N0S6 344 aaPredicted RBP19.19■□□□□ 0.66
RFTN1-201ENST00000334133 PYDC1Q8WXC3 89 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 ISL2Q96A47 359 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 ZNF333Q96JL9 665 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 GPR22Q99680 433 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 NT5MQ9NPB1 228 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 XPR1Q9UBH6 696 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 IPO11Q9UI26 975 aaKnown RBP19.19■□□□□ 0.66
RFTN1-201ENST00000334133 PPM1HQ9ULR3 514 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 RPL26L1Q9UNX3 145 aaKnown RBP19.19■□□□□ 0.66
RFTN1-201ENST00000334133 TMEM233B4DJY2 109 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 MATN3O15232 486 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 PIGNO95427 931 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 ETFBP38117 255 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 EFEMP1Q12805 493 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 DLG1Q12959 904 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 ANO7Q6IWH7 933 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 LINC00523Q86TU6 105 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 TMEM151AQ8N4L1 468 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 OR6Y1Q8NGX8 325 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 UCMAQ8WVF2 138 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 ELMO2Q96JJ3 720 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 SUSD3Q96L08 255 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 RHOJQ9H4E5 214 aa19.19■□□□□ 0.66
RFTN1-201ENST00000334133 MYLKQ15746 1914 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 HAPLN1P10915 354 aaPredicted RBP19.18■□□□□ 0.66
RFTN1-201ENST00000334133 ARSAP15289 507 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 EIF4EBP2Q13542 120 aaPredicted RBP19.18■□□□□ 0.66
RFTN1-201ENST00000334133 PSMD5Q16401 504 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 DNAL1Q4LDG9 190 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 PPM1LQ5SGD2 360 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 ARTNQ5T4W7 220 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 DEFB107AQ8IZN7 70 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 MAB21L3Q8N8X9 362 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 MRGPRX2Q96LB1 330 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 MCMBPQ9BTE3 642 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 C1QTNF1Q9BXJ1 281 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 SMOC2Q9H3U7 446 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 CATSPERBQ9H7T0 1116 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 OXSMQ9NWU1 459 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 DNAJC28Q9NX36 388 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 MTF2Q9Y483 593 aaPredicted RBP19.18■□□□□ 0.66
RFTN1-201ENST00000334133 FAM95CA0A1B0GW59 222 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 KLHL2O95198 593 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 PRKAR2AP13861 404 aaKnown RBP19.18■□□□□ 0.66
RFTN1-201ENST00000334133 CSE1LP55060 971 aaKnown RBP19.18■□□□□ 0.66
RFTN1-201ENST00000334133 TSNAXIP1Q2TAA8 658 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 ALFQ53S48 1182 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 RBM20Q5T481 1227 aaKnown RBP19.18■□□□□ 0.66
RFTN1-201ENST00000334133 FCRL5Q96RD9 977 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 IL12RB2Q99665 862 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 HCSTQ9UBK5 93 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 SLC27A5Q9Y2P5 690 aa19.18■□□□□ 0.66
RFTN1-201ENST00000334133 BUD23O43709 281 aaKnown RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 ATP6V1C1P21283 382 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 CDK7P50613 346 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 CDK18Q07002 472 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 NXNQ6DKJ4 435 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 CNSTQ6PJW8 725 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 HPS6Q86YV9 775 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 PPHLN1Q8NEY8 458 aaKnown RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 MIEF2Q96C03 454 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 TSNARE1Q96NA8 513 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 HAPLN3Q96S86 360 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 NOL6Q9H6R4 1146 aaKnown RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 CYP4F12Q9HCS2 524 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 GMIPQ9P107 970 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 STX18Q9P2W9 335 aaKnown RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 ZDHHC2Q9UIJ5 367 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 CDY1Q9Y6F8 540 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms