RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 OXCT1P55809 520 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CDKL1Q00532 357 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 NAPEPLDQ6IQ20 393 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF540Q8NDQ6 660 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 MED30Q96HR3 178 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 MED15Q96RN5 788 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 C2orf81A6NN90 581 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 VPS26AO75436 327 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CDK9P50750 372 aaKnown RBP10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CDC42P60953 191 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 IFNL1Q8IU54 200 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 KAT2BQ92831 832 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 SEMA4AQ9H3S1 761 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 KCNE2Q9Y6J6 123 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 TEX51A0A1B0GUA7 166 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 MAFKO60675 156 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 GJB6O95452 261 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 ETV1P50549 477 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 GALNT12Q8IXK2 581 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 FAM20CQ8IXL6 584 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 MTMR9Q96QG7 549 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 EHD4Q9H223 541 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 HALP42357 657 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 USP7Q93009 1102 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CHST12Q9NRB3 414 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 RRN3P2A6NIE6 340 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RARAP10276 462 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 CRABP2P29373 138 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 NEK3P51956 506 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RRP1BQ14684 758 aaKnown RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 FBXO43Q4G163 708 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 P2RY8Q86VZ1 359 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 SYNPOQ8N3V7 929 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 FBXO36Q8NEA4 188 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 VPS35Q96QK1 796 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 NDUFAF4Q9P032 175 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 ARMCX1Q9P291 453 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 UBQLN2Q9UHD9 624 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 LSM7Q9UK45 103 aaKnown RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 CBY1Q9Y3M2 126 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 SETD1AO15047 1707 aaKnown RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 LRIG2O94898 1065 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 HIST1H2ABP04908 130 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 ALX1Q15699 326 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 MEA1Q16626 185 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 HIST3H2AQ7L7L0 130 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 HIPK1Q86Z02 1210 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 HIST1H2ACQ93077 130 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 NXNL1Q96CM4 212 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 POLR3FQ9H1D9 316 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 SMPD3Q9NY59 655 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 SEC14L4Q9UDX3 406 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 NR2C2P49116 596 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RPS8P62241 208 aaKnown RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 ECT2LQ008S8 904 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 FAM153CQ494X1 144 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 TSEN2Q8NCE0 465 aaKnown RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF669Q96BR6 464 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 NEDD4LQ96PU5 975 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 CCDC3Q9BQI4 270 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 SENP6Q9GZR1 1112 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 TNKS2Q9H2K2 1166 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RASSF1Q9NS23 344 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 POLR3BQ9NW08 1133 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 MADDQ8WXG6 1647 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 MYL9P24844 172 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 DEFA5Q01523 94 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 TXNRD1Q16881 649 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 TBRG1Q3YBR2 411 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 FAM131AQ6UXB0 335 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF668Q96K58 619 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 BARHL2Q9NY43 387 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 KIAA0100Q14667 2235 aaKnown RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 OTOFQ9HC10 1997 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 PLD2O14939 933 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RBL1P28749 1068 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RGS7P49802 495 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 IFI35P80217 286 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 PDK2Q15119 407 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 AFTPHQ6ULP2 937 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 IQCKQ8N0W5 287 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 HGH1Q9BTY7 390 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 DENND2DQ9H6A0 471 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RETREG1Q9H6L5 497 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 METTL8Q9H825 291 aaKnown RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 TMEM216Q9P0N5 145 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 G3V2T6 193 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 TSTD3H0UI37 97 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 DNM1LO00429 736 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 ITGA10O75578 1167 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 ITGA2P17301 1181 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 MYBPC3Q14896 1274 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 VMACQ2NL98 169 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 ARSHQ5FYA8 562 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 STYK1Q6J9G0 422 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 HAGHLQ6PII5 290 aaPredicted RBP10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 SLC7A14Q8TBB6 771 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 TOR3AQ9H497 397 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms