RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 ZNF641Q96N77 438 aaPredicted RBP18.49■□□□□ 0.55
SOCS3-201ENST00000330871 PCDHGA3Q9Y5H0 932 aa18.49■□□□□ 0.55
SOCS3-201ENST00000330871 CNTNAP1P78357 1384 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 TCRBV3S1A0A5B6 114 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 TRIM64A6NGJ6 449 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 GCATO75600 419 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 CHEK2O96017 543 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 ASS1P00966 412 aaKnown RBP18.48■□□□□ 0.55
SOCS3-201ENST00000330871 PIGRP01833 764 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 CDH5P33151 784 aaPredicted RBP18.48■□□□□ 0.55
SOCS3-201ENST00000330871 RPL14P50914 215 aaKnown RBP18.48■□□□□ 0.55
SOCS3-201ENST00000330871 TSPY1Q01534 308 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 PRKCEQ02156 737 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 ARL13AQ5H913 290 aaPredicted RBP18.48■□□□□ 0.55
SOCS3-201ENST00000330871 ANKFN1Q8N957 763 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 CDKL2Q92772 493 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 EFHD1Q9BUP0 239 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 TXNDC16Q9P2K2 825 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 CDYLQ9Y232 598 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 ZNF646O15015 1829 aaPredicted RBP18.48■□□□□ 0.55
SOCS3-201ENST00000330871 HEATR9A2RTY3 570 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 PAPSS1O43252 624 aaPredicted RBP18.48■□□□□ 0.55
SOCS3-201ENST00000330871 GTF2A2P52657 109 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 ORC1Q13415 861 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 INSCQ1MX18 579 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 SLC36A3Q495N2 470 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 XRRA1Q6P2D8 792 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 VSIG10LQ86VR7 867 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 CDAN1Q8IWY9 1227 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 DCLK2Q8N568 766 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 NAT16Q8N8M0 369 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 MCUQ8NE86 351 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 SNX19Q92543 992 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 PBXIP1Q96AQ6 731 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 OTUD5Q96G74 571 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 ZNF347Q96SE7 839 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 SLC39A3Q9BRY0 314 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 TARS2Q9BW92 718 aaKnown RBP18.48■□□□□ 0.55
SOCS3-201ENST00000330871 PARVBQ9HBI1 364 aa18.48■□□□□ 0.55
SOCS3-201ENST00000330871 TRPC5Q9UL62 973 aaPredicted RBP18.48■□□□□ 0.55
SOCS3-201ENST00000330871 MYO18AQ92614 2054 aaKnown RBP18.47■□□□□ 0.55
SOCS3-201ENST00000330871 TMEM233B4DJY2 109 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 GUCY1B2O75343 617 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 CD19P15391 556 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 BCAR1P56945 870 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 MTERF2Q49AM1 385 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 AGAP7PQ5VUJ5 663 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 FRA10AC1Q70Z53 315 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 OR13F1Q8NGS4 319 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 CPXM1Q96SM3 734 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 UHRF1Q96T88 793 aaPredicted RBP18.47■□□□□ 0.55
SOCS3-201ENST00000330871 CISHQ9NSE2 258 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 CLDN25C9JDP6 229 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 NCAM1P13591 858 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 MAPK11Q15759 364 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 C6orf10Q5SRN2 563 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 ABRAXAS1Q6UWZ7 409 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 USP43Q70EL4 1123 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 CAMK1DQ8IU85 385 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 CCDC60Q8IWA6 550 aaPredicted RBP18.47■□□□□ 0.55
SOCS3-201ENST00000330871 CNTD1Q8N815 330 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 GJD4Q96KN9 370 aaPredicted RBP18.47■□□□□ 0.55
SOCS3-201ENST00000330871 RNF157Q96PX1 679 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 TMEM39BQ9GZU3 492 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 RAD21L1Q9H4I0 556 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 FBXO40Q9UH90 709 aa18.47■□□□□ 0.55
SOCS3-201ENST00000330871 CTDP1Q9Y5B0 961 aaPredicted RBP18.47■□□□□ 0.55
SOCS3-201ENST00000330871 NOTOA8MTQ0 251 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 RSL1D1O76021 490 aaKnown RBP18.46■□□□□ 0.55
SOCS3-201ENST00000330871 KRT75O95678 551 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 BMP2P12643 396 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 CCND2P30279 289 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 TFDP2Q14188 446 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 EMC2Q15006 297 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 C15orf59Q2T9L4 293 aaPredicted RBP18.46■□□□□ 0.55
SOCS3-201ENST00000330871 PIGZQ86VD9 579 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 PDZD8Q8NEN9 1154 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 FNIP1Q8TF40 1166 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 VRTNQ9H8Y1 702 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.46■□□□□ 0.55
SOCS3-201ENST00000330871 TMEM9Q9P0T7 183 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 ANKMY1Q9P2S6 941 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 PSME2Q9UL46 239 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 IFT52Q9Y366 437 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 FIS1Q9Y3D6 152 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 LRRIQ4A6NIV6 560 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 YDJCA8MPS7 323 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 MSI1O43347 362 aaKnown RBP18.46■□□□□ 0.55
SOCS3-201ENST00000330871 NR3C2P08235 984 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 MMP10P09238 476 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 PTPN2P17706 415 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 MGAT1P26572 445 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 GRIA4P48058 902 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 SP4Q02446 784 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 SPCS2Q15005 226 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 NDUFA5Q16718 116 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 XKR3Q5GH77 459 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 PPP2R2DQ66LE6 453 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 ERMP1Q7Z2K6 904 aa18.46■□□□□ 0.55
SOCS3-201ENST00000330871 MFSD2AQ8NA29 543 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms