RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TPI1P60174 286 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 MPPE1Q53F39 396 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 IZUMO3Q5VZ72 239 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 RAP1GAP2Q684P5 730 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 PPP1R21Q6ZMI0 780 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 C14orf80Q86SX3 495 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 LRRC49Q8IUZ0 686 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 ATP6V0D2Q8N8Y2 350 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 EXOC4Q96A65 974 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 LMLNQ96KR4 655 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 MAGEB5Q9BZ81 275 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 PABPC3Q9H361 631 aaKnown RBP16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 CATSPERBQ9H7T0 1116 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 SLC27A6Q9Y2P4 619 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 STARD13Q9Y3M8 1113 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 HEY1Q9Y5J3 304 aa16.79■□□□□ 0.28
PDLIM1-201ENST00000329399 DCLK1O15075 740 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 EIF3HO15372 352 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 ATG13O75143 517 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 PMS2P54278 862 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 MRPS21P82921 87 aaKnown RBP16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 GPS1Q13098 491 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 FSCBQ5H9T9 825 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 MS4A13Q5J8X5 152 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 NCBP2-AS2Q69YL0 99 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 CIR1Q86X95 450 aaPredicted RBP16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 PPIL6Q8IXY8 311 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 ZCCHC9Q8N567 271 aaKnown RBP16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 ZNF513Q8N8E2 541 aaPredicted RBP16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 SUMF1Q8NBK3 374 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 TFB1MQ8WVM0 346 aaKnown RBP16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 QKIQ96PU8 341 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 NEUROG2Q9H2A3 272 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 CD248Q9HCU0 757 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 MMP17Q9ULZ9 603 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 SLC8A2Q9UPR5 921 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 DNAH14Q0VDD8 3507 aa16.78■□□□□ 0.28
PDLIM1-201ENST00000329399 ABCA7Q8IZY2 2146 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 C5orf60A6NFR6 353 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 CREB3O43889 395 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 GCATO75600 419 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 IFNB1P01574 187 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 APOEP02649 317 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 CYBBP04839 570 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 TACR2P21452 398 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 AMPD1P23109 780 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 HOXA6P31267 233 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 CD70P32970 193 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 HSD17B3P37058 310 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 NUMBP49757 651 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 CRY1Q16526 586 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 KIAA1211LQ6NV74 962 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 LGI2Q8N0V4 545 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 BTN2A3PQ96KV6 586 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 TTC25Q96NG3 672 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 OLFM3Q96PB7 478 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 ABCB8Q9NUT2 735 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 CACNA2D2Q9NY47 1150 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 DTLQ9NZJ0 730 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 SAE1Q9UBE0 346 aaPredicted RBP16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 PCDHGA2Q9Y5H1 932 aa16.77■□□□□ 0.28
PDLIM1-201ENST00000329399 A0A1W2PQF6 199 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 PRR23AA6NEV1 266 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 GOLGA6L10A6NI86 522 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 GOLGA8KD6RF30 607 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 NUDT17P0C025 328 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 LPAL2Q16609 132 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 RNASEH2BQ5TBB1 312 aaKnown RBP16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 KIAA0907Q7Z7F0 614 aaPredicted RBP16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 ADIPOR2Q86V24 386 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 IGSF8Q969P0 613 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM118BQ9BPY3 351 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 KLC2Q9H0B6 622 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 PPARGC1AQ9UBK2 798 aaKnown RBP16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 INTS6Q9UL03 887 aaKnown RBP16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 INVSQ9Y283 1065 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 HS3ST4Q9Y661 456 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 SPTBN4Q9H254 2564 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 DCHS1Q96JQ0 3298 aa16.76■□□□□ 0.27
PDLIM1-201ENST00000329399 WASH4PA8MWX3 477 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 PAGE1O75459 146 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 ERCC2P18074 760 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 RPL22P35268 128 aaKnown RBP16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 CDK16Q00536 496 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 DENND2CQ68D51 928 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 FBXL22Q6P050 247 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 NPNTQ6UXI9 565 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 LRRC31Q6UY01 552 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 ZC3H18Q86VM9 953 aaKnown RBP16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 PYROXD2Q8N2H3 581 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 FRMD1Q8N878 549 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM71DQ8N9W8 422 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 TSEN2Q8NCE0 465 aaKnown RBP16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 TBC1D31Q96DN5 1066 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 GDAP1L1Q96MZ0 367 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 VAT1Q99536 393 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 SH3GL2Q99962 352 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 ELOVL2Q9NXB9 296 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms