RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 SLC39A11Q8N1S5 342 aa19.58■□□□□ 0.72
CHMP6-201ENST00000325167 C10orf82Q8WW14 230 aa19.58■□□□□ 0.72
CHMP6-201ENST00000325167 ZNF689Q96CS4 500 aaPredicted RBP19.58■□□□□ 0.72
CHMP6-201ENST00000325167 LRRC37BQ96QE4 947 aa19.58■□□□□ 0.72
CHMP6-201ENST00000325167 RANBP9Q96S59 729 aa19.58■□□□□ 0.72
CHMP6-201ENST00000325167 PRO3102Q9H379 93 aa19.58■□□□□ 0.72
CHMP6-201ENST00000325167 ATP11BQ9Y2G3 1177 aa19.58■□□□□ 0.72
CHMP6-201ENST00000325167 TCAF1Q9Y4C2 921 aa19.58■□□□□ 0.72
CHMP6-201ENST00000325167 ADAM12O43184 909 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 URODP06132 367 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 BGNP21810 368 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 OR1E1P30953 314 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 BNIP1Q12981 228 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 PDE1CQ14123 709 aaPredicted RBP19.57■□□□□ 0.72
CHMP6-201ENST00000325167 BTG3Q14201 252 aaPredicted RBP19.57■□□□□ 0.72
CHMP6-201ENST00000325167 HSP90AA5PQ58FG0 334 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 TMCO4Q5TGY1 634 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 DENND5AQ6IQ26 1287 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 KDELC1Q6UW63 502 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 ZNF354CQ86Y25 554 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 CNTN4Q8IWV2 1026 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 MRGPRX2Q96LB1 330 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 CLSTN3Q9BQT9 956 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 MAGEH1Q9H213 219 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.57■□□□□ 0.72
CHMP6-201ENST00000325167 SPG21Q9NZD8 308 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 MID2Q9UJV3 735 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 MTO1Q9Y2Z2 717 aaKnown RBP19.57■□□□□ 0.72
CHMP6-201ENST00000325167 PSAT1Q9Y617 370 aa19.57■□□□□ 0.72
CHMP6-201ENST00000325167 HEATR9A2RTY3 570 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 PMPCBO75439 489 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 UBOX5O94941 541 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 TPH1P17752 444 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 NMBRP28336 390 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 CDH4P55283 916 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 WNT3AP56704 352 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 TMPRSS15P98073 1019 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 SF3A3Q12874 501 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 RAB33AQ14088 237 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 SLC14A2Q15849 920 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 KIAA0930Q6ICG6 404 aaPredicted RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 NLRP9Q7RTR0 991 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 SREK1Q8WXA9 508 aaKnown RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 PTPRN2Q92932 1015 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 SIKE1Q9BRV8 207 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 FAM167BQ9BTA0 163 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 VN1R3Q9BXE9 311 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 C12orf65Q9H3J6 166 aaKnown RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 NT5MQ9NPB1 228 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 TXLNGQ9NUQ3 528 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 ANKRD6Q9Y2G4 727 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 PRAMEF11O60813 436 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 SIN3BO75182 1162 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 PAPSS2O95340 614 aaPredicted RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 ATP5BP06576 529 aaKnown RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 PPM1AP35813 382 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 NADSYN1Q6IA69 706 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 DDX53Q86TM3 631 aaKnown RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 LGI2Q8N0V4 545 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 DCLK2Q8N568 766 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 FITM2Q8N6M3 262 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 CALML6Q8TD86 181 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 PABPC5Q96DU9 382 aaKnown RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 ZNF419Q96HQ0 510 aaPredicted RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 RMDN2Q96LZ7 410 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 POLR1EQ9GZS1 481 aaKnown RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 RHOJQ9H4E5 214 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 CYP4F11Q9HBI6 524 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 ATP13A1Q9HD20 1204 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 NPHS2Q9NP85 383 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 SNX15Q9NRS6 342 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 IARS2Q9NSE4 1012 aaKnown RBP19.56■□□□□ 0.72
CHMP6-201ENST00000325167 YIPF1Q9Y548 306 aa19.56■□□□□ 0.72
CHMP6-201ENST00000325167 DOCK4Q8N1I0 1966 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 CLDN11O75508 207 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 LATS1O95835 1130 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 APOA4P06727 396 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 HMGA1P17096 107 aaKnown RBP19.55■□□□□ 0.72
CHMP6-201ENST00000325167 ELF1P32519 619 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 ETFBP38117 255 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 PLD1Q13393 1074 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 LBRQ14739 615 aaKnown RBP19.55■□□□□ 0.72
CHMP6-201ENST00000325167 FAM133BQ5BKY9 247 aaKnown RBP19.55■□□□□ 0.72
CHMP6-201ENST00000325167 FSTL4Q6MZW2 842 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 KIAA0408Q6ZU52 694 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 CHST9Q7L1S5 443 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 PPP1R14CQ8TAE6 165 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 PSMG2Q969U7 264 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 TUBB6Q9BUF5 446 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 ALG13Q9NP73 1137 aaKnown RBP19.55■□□□□ 0.72
CHMP6-201ENST00000325167 SLC17A6Q9P2U8 582 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 SSX2IPQ9Y2D8 614 aa19.55■□□□□ 0.72
CHMP6-201ENST00000325167 NYNRINQ9P2P1 1898 aaKnown RBP19.55■□□□□ 0.72
CHMP6-201ENST00000325167 J3KR12 359 aa19.54■□□□□ 0.72
CHMP6-201ENST00000325167 PLIN3O60664 434 aa19.54■□□□□ 0.72
CHMP6-201ENST00000325167 HNRNPCL1O60812 293 aaKnown RBP19.54■□□□□ 0.72
CHMP6-201ENST00000325167 EPOP01588 193 aa19.54■□□□□ 0.72
CHMP6-201ENST00000325167 RPL17P18621 184 aaKnown RBP19.54■□□□□ 0.72
CHMP6-201ENST00000325167 GRK2P25098 689 aa19.54■□□□□ 0.72
CHMP6-201ENST00000325167 SERPINH1P50454 418 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms