RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 HIC2Q96JB3 615 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 SPATA16Q9BXB7 569 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 FAM192AQ9GZU8 254 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 CAAP1Q9H8G2 361 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 EIF2B3Q9NR50 452 aaKnown RBP13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 MPP6Q9NZW5 540 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 SFMBT1Q9UHJ3 866 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 ASB3Q9Y575 518 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 PPIL2Q13356 520 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 PITRM1Q5JRX3 1037 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 HABP4Q5JVS0 413 aaKnown RBP13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 PAOXQ6QHF9 649 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 AMIGO2Q86SJ2 522 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 APLFQ8IW19 511 aaPredicted RBP13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 HNRNPABQ99729 332 aaKnown RBP13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 GBA3Q9H227 469 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 ADAM28Q9UKQ2 775 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 PSMD13Q9UNM6 376 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 COMMD10Q9Y6G5 202 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 FER1L6Q2WGJ9 1857 aa13.07□□□□□ -0.32
HMGCS1-201ENST00000325110 CRCPO75575 148 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 SNAI1O95863 264 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 CYP2B6P20813 491 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 CD68P34810 354 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 CXCR3P49682 368 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 SCNN1GP51170 649 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 DAOAP59103 153 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 TAS2R39P59534 338 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 MSLNQ13421 630 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 FBXO48Q5FWF7 155 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 OXSMQ9NWU1 459 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 NCKIPSDQ9NZQ3 722 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 RCOR3Q9P2K3 495 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 V9GYQ6 96 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 STAU1O95793 577 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 HMBSP08397 361 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 RANBP1P43487 201 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 MTTPP55157 894 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 UGP2Q16851 508 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 FAM83EQ2M2I3 478 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 RBM44Q6ZP01 1051 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 PDCD6IPQ8WUM4 868 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 ATP6V1E2Q96A05 226 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 TBL1YQ9BQ87 522 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 TINF2Q9BSI4 451 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 RHOJQ9H4E5 214 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 TLL2Q9Y6L7 1015 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 TTC24A2A3L6 582 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 C9IYK1 514 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 PIRO00625 290 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 DCLK1O15075 740 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 DLX3O60479 287 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 PRKCGP05129 697 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 NPY2RP49146 381 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 CLCNKBP51801 687 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 CDH13P55290 713 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 GJA9P57773 515 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 STX1BP61266 288 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 ITGA7Q13683 1181 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 GK3PQ14409 553 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 DUSP28Q4G0W2 176 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 DDIASQ8IXT1 998 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 CRTAC1Q9NQ79 661 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 STK39Q9UEW8 545 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 LZTS1Q9Y250 596 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 CRYL1Q9Y2S2 319 aa13.06□□□□□ -0.32
HMGCS1-201ENST00000325110 MTSS1O43312 755 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 AKAP10O43572 662 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 DNAJA2O60884 412 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 PAMP19021 973 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 LAMB3Q13751 1172 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 MFSD10Q14728 455 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 SLC5A9Q2M3M2 681 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 KLC3Q6P597 504 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 TAC4Q86UU9 113 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 ZC3HC1Q86WB0 502 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 SCAMP5Q8TAC9 235 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 SMOQ99835 787 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 SLC39A3Q9BRY0 314 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 AP5M1Q9H0R1 490 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 NT5MQ9NPB1 228 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 NRCAMQ92823 1304 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 MATN2O00339 956 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 AURKAO14965 403 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 CABYRO75952 493 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 APOA4P06727 396 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 BRCC3P46736 316 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 CD151P48509 253 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 RAB27AP51159 221 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 ARPP19P56211 112 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 RAB10P61026 200 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 DPYSQ14117 519 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 246.3 ms