RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 PRG3Q9Y2Y8 225 aaPredicted RBP21.71■■□□□ 1.07
LIMS2-201ENST00000324938 MRPL42Q9Y6G3 142 aaKnown RBP21.71■■□□□ 1.07
LIMS2-201ENST00000324938 NEBLO76041 1014 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 TM7SF2O76062 418 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 VAPBO95292 243 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 SLC35E2BP0CK96 405 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 MAGEA11P43364 429 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 TBX4P57082 545 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 ZYG11AQ6WRX3 759 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 ZNF781Q8N8C0 355 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 FATE1Q969F0 183 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 FAM161BQ96MY7 647 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 TSNARE1Q96NA8 513 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 TASP1Q9H6P5 420 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 TREX1Q9NSU2 369 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 DNAJB4Q9UDY4 337 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 PCDHB5Q9Y5E4 795 aa21.71■■□□□ 1.07
LIMS2-201ENST00000324938 SYN3O14994 580 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 PHGDHO43175 533 aaKnown RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 PEX11BO96011 259 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 COL6A2P12110 1019 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 PTDSS1P48651 473 aaKnown RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 NDST2P52849 883 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 USP46P62068 366 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 SLC12A1Q13621 1099 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 VARS2Q5ST30 1063 aaKnown RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 ARMC3Q5W041 872 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 KIAA0930Q6ICG6 404 aaPredicted RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 DENND6AQ8IWF6 608 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 TMEM151AQ8N4L1 468 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 GATA5Q9BWX5 397 aaPredicted RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 SLC25A51Q9H1U9 297 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 RNF186Q9NXI6 227 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 IL37Q9NZH6 218 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 GMIPQ9P107 970 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 TK2O00142 265 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 PSMG1O95456 288 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 RHOQP17081 205 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 PAMP19021 973 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 GRK4P32298 578 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 PRKAA2P54646 552 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 MPP1Q00013 466 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 RCN1Q15293 331 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 MAP3K21Q5TCX8 1036 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 KDELC1Q6UW63 502 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 SCUBE1Q8IWY4 988 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 PRKD2Q9BZL6 878 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 UBE2OQ9C0C9 1292 aaKnown RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 TRPV6Q9H1D0 765 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 YY1AP1Q9H869 796 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 CPSF2Q9P2I0 782 aaKnown RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 STOML1Q9UBI4 398 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 SLC2A6Q9UGQ3 507 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 ABT1Q9ULW3 272 aaKnown RBP21.7■■□□□ 1.06
LIMS2-201ENST00000324938 LRRC42Q9Y546 428 aa21.7■■□□□ 1.06
LIMS2-201ENST00000324938 CEP350Q5VT06 3117 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 KRT36O76013 467 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 SBK3P0C264 359 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 GCKP35557 465 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 CPOXP36551 454 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 CTBP1Q13363 440 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 HNRNPDQ14103 355 aaKnown RBP21.69■■□□□ 1.06
LIMS2-201ENST00000324938 VWA5B1Q5TIE3 1220 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 EPGNQ6UW88 154 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 NET1Q7Z628 596 aaPredicted RBP21.69■■□□□ 1.06
LIMS2-201ENST00000324938 SLC41A1Q8IVJ1 513 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 GLT1D1Q96MS3 346 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 ZYG11BQ9C0D3 744 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 TMEM248Q9NWD8 314 aa21.69■■□□□ 1.06
LIMS2-201ENST00000324938 FAM92AA1XBS5 289 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 F8W8V4 182 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 SAT1P21673 171 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 SLC1A2P43004 574 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 WNT3AP56704 352 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 MXRA7P84157 204 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 USP4Q13107 963 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 MS4A13Q5J8X5 152 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 LIPMQ5VYY2 423 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 ULK2Q8IYT8 1036 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 CENPLQ8N0S6 344 aaPredicted RBP21.68■■□□□ 1.06
LIMS2-201ENST00000324938 STYXQ8WUJ0 223 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 FAM193BQ96PV7 902 aaPredicted RBP21.68■■□□□ 1.06
LIMS2-201ENST00000324938 FTHL17Q9BXU8 183 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 COG4Q9H9E3 785 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 ARNT2Q9HBZ2 717 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 FAM95CA0A1B0GW59 222 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 CHRNA4P43681 627 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 RENBPP51606 427 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 RAB10P61026 200 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 TAF11Q15544 211 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 CNGA3Q16281 694 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 C2CD4AQ8NCU7 369 aaPredicted RBP21.68■■□□□ 1.06
LIMS2-201ENST00000324938 KCTD4Q8WVF5 259 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 STMN2Q93045 179 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 IMP4Q96G21 291 aaKnown RBP21.68■■□□□ 1.06
LIMS2-201ENST00000324938 FAM167BQ9BTA0 163 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 ATP13A1Q9HD20 1204 aa21.68■■□□□ 1.06
LIMS2-201ENST00000324938 DONSONQ9NYP3 566 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms