RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 SPDYCQ5MJ68 293 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 GRTP1Q5TC63 336 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 CST9Q5W186 159 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 ARHGAP17Q68EM7 881 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 DIS3LQ8TF46 1054 aaKnown RBP11.15□□□□□ -0.62
TOP3A-201ENST00000321105 PBXIP1Q96AQ6 731 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 RPL10LQ96L21 214 aaKnown RBP11.15□□□□□ -0.62
TOP3A-201ENST00000321105 EFHD1Q9BUP0 239 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 SLC39A8Q9C0K1 460 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 EML4Q9HC35 981 aaKnown RBP11.15□□□□□ -0.62
TOP3A-201ENST00000321105 ARL8BQ9NVJ2 186 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 FZD10Q9ULW2 581 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 BCLAF3A2AJT9 711 aaKnown RBP11.15□□□□□ -0.62
TOP3A-201ENST00000321105 BTN3A1O00481 513 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 AKAP10O43572 662 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 E2F6O75461 281 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 UNC5CO95185 931 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 ZNF865P0CJ78 1059 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-201ENST00000321105 TFEBP19484 476 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 GRIA4P48058 902 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 KCNQ1P51787 676 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 GRM3Q14832 879 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 DPYSL2Q16555 572 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 FUT10Q6P4F1 479 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 DNAJC9Q8WXX5 260 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 CCSER2Q9H7U1 834 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 GLOD4Q9HC38 313 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 MID1IP1Q9NPA3 183 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 CNTN3Q9P232 1028 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 CIDEBQ9UHD4 219 aa11.15□□□□□ -0.62
TOP3A-201ENST00000321105 A0A0U1RQF3 1178 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 NR5A2O00482 541 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 CCND1P24385 295 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 NPY2RP49146 381 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 CDK16Q00536 496 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 BOP1Q14137 746 aaKnown RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 PTPRCAPQ14761 206 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 PCID2Q5JVF3 399 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 DET1Q7L5Y6 550 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 SUGP1Q8IWZ8 645 aaKnown RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HMCESQ96FZ2 354 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 DDX50Q9BQ39 737 aaKnown RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ACBD6Q9BR61 282 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ABCA3Q99758 1704 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HEATR9A2RTY3 570 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 TBL1XO60907 577 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 CHRNA1P02708 482 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 CALB2P22676 271 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 GRK2P25098 689 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 IVDP26440 423 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 TUFMP49411 452 aaKnown RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 NCALDP61601 193 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 INCA1Q0VD86 236 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 SKIV2LQ15477 1246 aaKnown RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 DNAL1Q4LDG9 190 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 FSTL4Q6MZW2 842 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ADGRD1Q6QNK2 874 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 NAPRTQ6XQN6 538 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 LZTR1Q8N653 840 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 NIPA2Q8N8Q9 360 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 SNX19Q92543 992 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 SH3KBP1Q96B97 665 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ACOX2Q99424 681 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HCSTQ9UBK5 93 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 FBXW11Q9UKB1 542 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ZMYND8Q9ULU4 1186 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ARHGAP26Q9UNA1 814 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 PTPRNQ16849 979 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ADCK2Q7Z695 626 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 TTC9BQ8N6N2 239 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 EME1Q96AY2 570 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 QKIQ96PU8 341 aaKnown RBP eCLIP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 CLPBQ9H078 707 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 DLGAP2Q9P1A6 1054 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 PIRO00625 290 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HOXA2O43364 376 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 LUC7L3O95232 432 aaKnown RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HIST1H2AGP0C0S8 130 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HSPA8P11142 646 aaKnown RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ATP6V1B1P15313 513 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 VAV1P15498 845 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HIST1H2ADP20671 130 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 GABRR2P28476 465 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 SLC10A7Q0GE19 358 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 RPS27LQ71UM5 84 aaKnown RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 ZNF467Q7Z7K2 595 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-201ENST00000321105 C3orf58Q8NDZ4 430 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 RNF217Q8TC41 542 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 STK32AQ8WU08 396 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 KBTBD7Q8WVZ9 684 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 NXNL1Q96CM4 212 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HIST1H2AHQ96KK5 128 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 HIST1H2AJQ99878 128 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 EBF4Q9BQW3 602 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 H2AFJQ9BTM1 129 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 WWOXQ9NZC7 414 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 PLLPQ9Y342 182 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms