RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 VPS50Q96JG6 964 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 RPF2Q9H7B2 306 aaKnown RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 RPF1Q9H9Y2 349 aaKnown RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 MORF4L1Q9UBU8 362 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 HESX1Q9UBX0 185 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 EGFL7Q9UHF1 273 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 RUVBL2Q9Y230 463 aaKnown RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 WDR37Q9Y2I8 494 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 CORINQ9Y5Q5 1042 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 A0A087WXM4 84 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 C1orf232A0A0U1RR37 186 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 HEATR9A2RTY3 570 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 VWA5AO00534 786 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 KCNH1O95259 989 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 HSPA8P11142 646 aaKnown RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 NR4A1P22736 598 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 GABRB3P28472 473 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 BMXP51813 675 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 PRKCQQ04759 706 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 IFRD2Q12894 506 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 DPYSQ14117 519 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 PRPSAP1Q14558 356 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 USP10Q14694 798 aaKnown RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 GRM3Q14832 879 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 PLCL1Q15111 1095 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 AMHR2Q16671 573 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 ZBED5Q49AG3 693 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 PPP1R26Q5T8A7 1209 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 EGFLAMQ63HQ2 1017 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 ZPBP2Q6X784 338 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 NAT16Q8N8M0 369 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 NDRG1Q92597 394 aaKnown RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 VPS39Q96JC1 886 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 TSNARE1Q96NA8 513 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 MUC3BQ9H195 1237 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 CHRAC1Q9NRG0 131 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 KLHL8Q9P2G9 620 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 V9GYQ6 96 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 LACTBL1A8MY62 500 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 HCRTO43612 131 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 LCP1P13796 627 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ZFXP17010 805 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 BCAP31P51572 246 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 SLC7A2P52569 658 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 PLK1P53350 603 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 CSE1LP55060 971 aaKnown RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 LAMTOR4Q0VGL1 99 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 PRKAA1Q13131 559 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 NR1D2Q14995 579 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 MAP7D1Q3KQU3 841 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 NHSL2Q5HYW2 709 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 LIPMQ5VYY2 423 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 OLFML1Q6UWY5 402 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 TBC1D15Q8TC07 691 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 BORCS5Q969J3 196 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 HPDLQ96IR7 371 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 BCO2Q9BYV7 579 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 DRC3Q9H069 523 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 HIPK3Q9H422 1215 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 PRDM16Q9HAZ2 1276 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 XPR1Q9UBH6 696 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ZNHIT2Q9UHR6 403 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 TMEM247A6NEH6 219 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 PFKMP08237 780 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 VDRP11473 427 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 TSPAN8P19075 237 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 EEF1B2P24534 225 aaKnown RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 GRM5P41594 1212 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 CLCN2P51788 898 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 CREB5Q02930 508 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 MTA1Q13330 715 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 RAB39AQ14964 217 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 PDCD4Q53EL6 469 aaKnown RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ATF7IP2Q5U623 682 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 DHRS4L2Q6PKH6 230 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 RNF135Q8IUD6 432 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ZC3H7AQ8IWR0 971 aaKnown RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 LSMEM2Q8N112 164 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ZNF567Q8N184 647 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 FSTL5Q8N475 847 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ARL10Q8N8L6 244 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 CORO1BQ9BR76 489 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 MTG1Q9BT17 334 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ANKRD60Q9BZ19 345 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 TMEM134Q9H6X4 195 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 GBA2Q9HCG7 927 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 VPS45Q9NRW7 570 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 VPS28Q9UK41 221 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 VANGL2Q9ULK5 521 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 TSC22D4Q9Y3Q8 395 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 BPTFQ12830 3046 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 PTPRFP10586 1907 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 B4GAT1O43505 415 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 TADA2AO75478 443 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 BMP10O95393 424 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 SBK3P0C264 359 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 CDH3P22223 829 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 FASTKQ14296 549 aaKnown RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ZNF829Q3KNS6 432 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms