RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 BTN3A1O00481 513 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 PAPSS1O43252 624 aaPredicted RBP13.4□□□□□ -0.26
NBPF3-201ENST00000318220 MAGEC1O60732 1142 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 ELP6Q0PNE2 266 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 ACAP1Q15027 740 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 FBXO38Q6PIJ6 1188 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 FUKQ8N0W3 1084 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 ARMC2Q8NEN0 867 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 TWNKQ96RR1 684 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 VAT1Q99536 393 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 TULP2O00295 520 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 FPGTO14772 594 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 FFAR2O15552 330 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 ZNF623O75123 536 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 WARSP23381 471 aaKnown RBP13.4□□□□□ -0.26
NBPF3-201ENST00000318220 NR2C2P49116 596 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 RPL6Q02878 288 aaKnown RBP13.4□□□□□ -0.26
NBPF3-201ENST00000318220 TGM3Q08188 693 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 TAF11Q15544 211 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 ANKS6Q68DC2 871 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 C11orf74Q86VG3 221 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 MYO19Q96H55 970 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 ZNF333Q96JL9 665 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 FAM167BQ9BTA0 163 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 NLNQ9BYT8 704 aa13.4□□□□□ -0.26
NBPF3-201ENST00000318220 APOC4-APOC2K7ER74 178 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 ADAMTS4O75173 837 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 APOC2P02655 101 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 HOXB8P17481 243 aaPredicted RBP13.4□□□□□ -0.27
NBPF3-201ENST00000318220 AKT2P31751 481 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 CSKP41240 450 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 CCZ1BP86790 482 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 CCZ1P86791 482 aaPredicted RBP13.4□□□□□ -0.27
NBPF3-201ENST00000318220 SOX4Q06945 474 aaPredicted RBP13.4□□□□□ -0.27
NBPF3-201ENST00000318220 EFTUD2Q15029 972 aaKnown RBP eCLIP13.4□□□□□ -0.27
NBPF3-201ENST00000318220 ANKRD20A2Q5SQ80 823 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 ANKRD20A1Q5TYW2 823 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 SYPL2Q5VXT5 272 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 FBXW10Q5XX13 1052 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 ENPP7Q6UWV6 458 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 FBXO25Q8TCJ0 367 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 TOP1MTQ969P6 601 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 PRPF18Q99633 342 aaKnown RBP13.4□□□□□ -0.27
NBPF3-201ENST00000318220 FAM129AQ9BZQ8 928 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.4□□□□□ -0.27
NBPF3-201ENST00000318220 SH3BP4Q9P0V3 963 aa13.4□□□□□ -0.27
NBPF3-201ENST00000318220 PHRF1Q9P1Y6 1649 aaKnown RBP13.4□□□□□ -0.27
NBPF3-201ENST00000318220 CUL9Q8IWT3 2517 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 ACACAQ13085 2346 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 SNAP91O60641 907 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 KLF8O95600 359 aaPredicted RBP13.39□□□□□ -0.27
NBPF3-201ENST00000318220 POP4O95707 220 aaKnown RBP13.39□□□□□ -0.27
NBPF3-201ENST00000318220 CDH3P22223 829 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 ZNF135P52742 658 aaPredicted RBP13.39□□□□□ -0.27
NBPF3-201ENST00000318220 IFT88Q13099 833 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 TP53BP2Q13625 1128 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 TRIP4Q15650 581 aaPredicted RBP13.39□□□□□ -0.27
NBPF3-201ENST00000318220 EOGTQ5NDL2 527 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 IRGCQ6NXR0 463 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 LAYNQ6UX15 382 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 OSTM1Q86WC4 334 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 GALNT13Q8IUC8 556 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 ST6GALNAC4Q9H4F1 302 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 IL1RL2Q9HB29 575 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 MIEF1Q9NQG6 463 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 RAI2Q9Y5P3 530 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 ECT2LQ008S8 904 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 SPIRE1Q08AE8 756 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 FAM129CQ86XR2 697 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 SMARCD2Q92925 531 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 PSMG2Q969U7 264 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 NMRK1Q9NWW6 199 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 ALKBH4Q9NXW9 302 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 SLX4Q8IY92 1834 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 DDX3YO15523 660 aaKnown RBP13.39□□□□□ -0.27
NBPF3-201ENST00000318220 NBNO60934 754 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 LPOP22079 712 aaPredicted RBP13.39□□□□□ -0.27
NBPF3-201ENST00000318220 CCNG2Q16589 344 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 FAM133BQ5BKY9 247 aaKnown RBP13.39□□□□□ -0.27
NBPF3-201ENST00000318220 BEND6Q5SZJ8 279 aaPredicted RBP13.39□□□□□ -0.27
NBPF3-201ENST00000318220 KLHL35Q6PF15 583 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 TAGAPQ8N103 731 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 CCDC197Q8NCU1 140 aa13.39□□□□□ -0.27
NBPF3-201ENST00000318220 NOL3O60936 208 aaKnown RBP13.38□□□□□ -0.27
NBPF3-201ENST00000318220 IDSP22304 550 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 MMP8P22894 467 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 ELK3P41970 407 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 STX3Q13277 289 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 SLC29A2Q14542 456 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 SF1Q15637 639 aaKnown RBP13.38□□□□□ -0.27
NBPF3-201ENST00000318220 CCDC142Q17RM4 750 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 MINDY4Q4G0A6 757 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 KCNMB4Q86W47 210 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 ASPSCR1Q9BZE9 553 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 FAM83DQ9H4H8 585 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 CHST7Q9NS84 486 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 HCFC1R1Q9NWW0 138 aa13.38□□□□□ -0.27
NBPF3-201ENST00000318220 PSMC3IPQ9P2W1 217 aaPredicted RBP13.38□□□□□ -0.27
NBPF3-201ENST00000318220 TRPC4Q9UBN4 977 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms