RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ARHGEF2Q92974 986 aaKnown RBP18.1■□□□□ 0.49
TPM1-203ENST00000317516 LRIG1Q96JA1 1093 aa18.1■□□□□ 0.49
TPM1-203ENST00000317516 FEM1CQ96JP0 617 aa18.1■□□□□ 0.49
TPM1-203ENST00000317516 MCEEQ96PE7 176 aa18.1■□□□□ 0.49
TPM1-203ENST00000317516 CNPY3Q9BT09 278 aa18.1■□□□□ 0.49
TPM1-203ENST00000317516 DONSONQ9NYP3 566 aa18.1■□□□□ 0.49
TPM1-203ENST00000317516 FCF1Q9Y324 198 aaKnown RBP18.1■□□□□ 0.49
TPM1-203ENST00000317516 ZSCAN5CA6NGD5 496 aaPredicted RBP18.09■□□□□ 0.49
TPM1-203ENST00000317516 TEX33O43247 280 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 ZNF821O75541 412 aaPredicted RBP18.09■□□□□ 0.49
TPM1-203ENST00000317516 DKK1O94907 266 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 LDOC1O95751 146 aaPredicted RBP18.09■□□□□ 0.49
TPM1-203ENST00000317516 CDK4P11802 303 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 ITGB7P26010 798 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 EPHB2P29323 1055 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 ZNF165P49910 485 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 CCNHP51946 323 aaPredicted RBP18.09■□□□□ 0.49
TPM1-203ENST00000317516 SNRPD1P62314 119 aaKnown RBP18.09■□□□□ 0.49
TPM1-203ENST00000317516 TMPRSS7Q7RTY8 843 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 ZNF354CQ86Y25 554 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 RYBPQ8N488 228 aaPredicted RBP18.09■□□□□ 0.49
TPM1-203ENST00000317516 FAM174AQ8TBP5 190 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 EPAS1Q99814 870 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 CATSPERBQ9H7T0 1116 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 NDFIP2Q9NV92 336 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 TOR4AQ9NXH8 423 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 WASF2Q9Y6W5 498 aa18.09■□□□□ 0.49
TPM1-203ENST00000317516 TCRBV5S1A1TA0A578 114 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 CCP110O43303 1012 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 KDELR3O43731 214 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 POP4O95707 220 aaKnown RBP18.08■□□□□ 0.48
TPM1-203ENST00000317516 HNRNPA2B1P22626 353 aaKnown RBP18.08■□□□□ 0.48
TPM1-203ENST00000317516 EPHA8P29322 1005 aaPredicted RBP18.08■□□□□ 0.48
TPM1-203ENST00000317516 YBEYP58557 167 aaPredicted RBP18.08■□□□□ 0.48
TPM1-203ENST00000317516 RPS21P63220 83 aaKnown RBP18.08■□□□□ 0.48
TPM1-203ENST00000317516 SHBQ15464 509 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 ZNF284Q2VY69 593 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 CAVIN1Q6NZI2 390 aaKnown RBP18.08■□□□□ 0.48
TPM1-203ENST00000317516 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 CASKIN2Q8WXE0 1202 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 TM6SF2Q9BZW4 377 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 PARVAQ9NVD7 372 aa18.08■□□□□ 0.48
TPM1-203ENST00000317516 A0A1W2PQC6 194 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 BUB1O43683 1085 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 CD160O95971 181 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 GSRP00390 522 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 ADRB3P13945 408 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 RPL7AP62424 266 aaKnown RBP18.07■□□□□ 0.48
TPM1-203ENST00000317516 RAD51Q06609 339 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 ASIC2Q16515 512 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 CCDC157Q569K6 752 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 PPP1R15BQ5SWA1 713 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 KIAA1161Q6NSJ0 714 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 SPATS2Q86XZ4 545 aaKnown RBP18.07■□□□□ 0.48
TPM1-203ENST00000317516 EID2Q8N6I1 236 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 RTL3Q8N8U3 475 aaKnown RBP18.07■□□□□ 0.48
TPM1-203ENST00000317516 TMEM145Q8NBT3 493 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 OR2AP1Q8NGE2 309 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 KLK6Q92876 244 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 RAB7BQ96AH8 199 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 CNDP2Q96KP4 475 aaKnown RBP18.07■□□□□ 0.48
TPM1-203ENST00000317516 MAGEB5Q9BZ81 275 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 ZDHHC6Q9H6R6 413 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 FZD10Q9ULW2 581 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 PCDHGA1Q9Y5H4 931 aa18.07■□□□□ 0.48
TPM1-203ENST00000317516 KMT2BQ9UMN6 2715 aaPredicted RBP18.07■□□□□ 0.48
TPM1-203ENST00000317516 USP24Q9UPU5 2620 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 ENC1O14682 589 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 AP1G1O43747 822 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 CREB3O43889 395 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 C1SP09871 688 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 THEGLP0DJG4 465 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 PRLRP16471 622 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 HTR7P34969 479 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 BNIP3Q12983 259 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 MYLK3Q32MK0 819 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 INO80DQ53TQ3 878 aaPredicted RBP18.06■□□□□ 0.48
TPM1-203ENST00000317516 ZNF805Q5CZA5 627 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 SFMBT2Q5VUG0 894 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 TMC6Q7Z403 805 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 DCP2Q8IU60 420 aaKnown RBP18.06■□□□□ 0.48
TPM1-203ENST00000317516 PYROXD2Q8N2H3 581 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 BAP1Q92560 729 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 ARHGEF26Q96DR7 871 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 OSBPL1AQ9BXW6 950 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 SLC17A9Q9BYT1 436 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 EDEM3Q9BZQ6 932 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 KLHL11Q9NVR0 708 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 AIPL1Q9NZN9 384 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 NEU3Q9UQ49 428 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 FADS3Q9Y5Q0 445 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 ACTL7AQ9Y615 435 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 HS3ST3A1Q9Y663 406 aa18.06■□□□□ 0.48
TPM1-203ENST00000317516 LRRC53A6NM62 1247 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 WASH4PA8MWX3 477 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 TMCO5BA8MYB1 307 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 EIF3CLB5ME19 914 aaKnown RBP18.05■□□□□ 0.48
TPM1-203ENST00000317516 KRIT1O00522 736 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 NEMP1O14524 444 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 FGF10O15520 208 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms