RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 RPL10LQ96L21 214 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TBL1YQ9BQ87 522 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 FSD1LQ9BXM9 530 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TMEM248Q9NWD8 314 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 SAMD15Q9P1V8 674 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ZFATQ9P243 1243 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 PCDHGC4Q9Y5F7 938 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 BACE2Q9Y5Z0 518 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 GRM6O15303 877 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 BNIP3LO60238 219 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 LYPLA1O75608 230 aaPredicted RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 NEBLO76041 1014 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 PRAMEF12O95522 483 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 KITP10721 976 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 EPCAMP16422 314 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 RHOQP17081 205 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 HDCP19113 662 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ELF1P32519 619 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 GLRBP48167 497 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 SCNN1BP51168 640 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 PDE1CQ14123 709 aaPredicted RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 PDZD4Q76G19 769 aaPredicted RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 BEND5Q7L4P6 421 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 BBS7Q8IWZ6 715 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 UMODL1-AS1Q8N2C9 162 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CARNMT1Q8N4J0 409 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TMEM199Q8N511 208 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ARRDC2Q8TBH0 407 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 PDCD6IPQ8WUM4 868 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 C1orf74Q96LT6 269 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ZSWIM3Q96MP5 696 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TM6SF2Q9BZW4 377 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ZBP1Q9H171 429 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 NOD2Q9HC29 1040 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TRPM5Q9NZQ8 1165 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CPSF2Q9P2I0 782 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 F5H5T6 163 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 FGF10O15520 208 aaPredicted RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CD160O95971 181 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CKMP06732 381 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 C8AP07357 584 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ATP2A2P16615 1042 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 PGAM1P18669 254 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 SLC8A1P32418 973 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ADRA1AP35348 466 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ETV4P43268 484 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TUFMP49411 452 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 HARS2P49590 506 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 SERINC3Q13530 473 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 LRRC73Q5JTD7 316 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 MARC1Q5VT66 337 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 FSTL4Q6MZW2 842 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 RPS27LQ71UM5 84 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 DDX53Q86TM3 631 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 APCDD1Q8J025 514 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ATP6V0D2Q8N8Y2 350 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 RFWD2Q8NHY2 731 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 AGR3Q8TD06 166 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TMEM106CQ9BVX2 250 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 MCOLN1Q9GZU1 580 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ENTPD7Q9NQZ7 604 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 EMCNQ9ULC0 261 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CHKBQ9Y259 395 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 FCF1Q9Y324 198 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 RRP15Q9Y3B9 282 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 EBAG9O00559 213 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 SMAD6O43541 496 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TLL1O43897 1013 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 FGBP02675 491 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 F11P03951 625 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ITGA2BP08514 1039 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CTNNB1P35222 781 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 RAB33AQ14088 237 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TEDDM1Q5T9Z0 273 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CXorf57Q6NSI4 855 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 TMEM135Q86UB9 458 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 DCLK2Q8N568 766 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 VPS11Q9H270 941 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 IL23AQ9NPF7 189 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 BFARQ9NZS9 450 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 MARCH4Q9P2E8 410 aaPredicted RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 SLC4A7Q9Y6M7 1214 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 PLXNA4Q9HCM2 1894 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 NCAM2O15394 837 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 TBL1XO60907 577 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 SUN1O94901 812 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 GSRP00390 522 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 C1RP00736 705 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 CTSOP43234 321 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 CDKN1CP49918 316 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 NEK3P51956 506 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 MESP2Q0VG99 397 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 HHATQ5VTY9 493 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 RNF219Q5W0B1 726 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 STEAP4Q687X5 459 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 KDELC1Q6UW63 502 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 RANBP10Q6VN20 620 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 OTOAQ7RTW8 1153 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 PTAR1Q7Z6K3 402 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 KCNMB4Q86W47 210 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms