RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PHGDHO43175 533 aaKnown RBP12.61□□□□□ -0.39
RNF4-201ENST00000314289 TLR5O60602 858 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 GSRP00390 522 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 BPGMP07738 259 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 T-ENOLP0DO92 83 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 FGFR3P22607 806 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 MRPL58Q14197 206 aaKnown RBP12.61□□□□□ -0.39
RNF4-201ENST00000314289 IHHQ14623 411 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 CNGA3Q16281 694 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 CCNJLQ8IV13 435 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 C10orf107Q8IVU9 208 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 SLC7A6OSQ96CW6 309 aaPredicted RBP12.61□□□□□ -0.39
RNF4-201ENST00000314289 TSC22D3Q99576 134 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 DENND2DQ9H6A0 471 aaPredicted RBP12.61□□□□□ -0.39
RNF4-201ENST00000314289 PATJQ8NI35 1801 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 DCTN3O75935 186 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 USP1O94782 785 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 ACVRL1P37023 503 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 CD86P42081 329 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 GLRBP48167 497 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 MPP1Q00013 466 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 DSC2Q02487 901 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 MPP3Q13368 585 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 CCDC6Q16204 474 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 DENND5AQ6IQ26 1287 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 TMEM154Q6P9G4 183 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 NPAS4Q8IUM7 802 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 RBBP8Q99708 897 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 IL22Q9GZX6 179 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 NACA2Q9H009 215 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 CHD7Q9P2D1 2997 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 BUD23O43709 281 aaKnown RBP12.6□□□□□ -0.39
RNF4-201ENST00000314289 ATP5HO75947 161 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 PRKCGP05129 697 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 ATP6V1C1P21283 382 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 TSNAXIP1Q2TAA8 658 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 C11orf91Q3C1V1 193 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 HSF5Q4G112 596 aaPredicted RBP12.6□□□□□ -0.39
RNF4-201ENST00000314289 BEND5Q7L4P6 421 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 CLNKQ7Z7G1 428 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 TEX9Q8N6V9 391 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 DNAJC9Q8WXX5 260 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 MRGPRX2Q96LB1 330 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 IL12RB2Q99665 862 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 CPNE1Q99829 537 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 TTPALQ9BTX7 342 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 OXCT2Q9BYC2 517 aaPredicted RBP12.6□□□□□ -0.39
RNF4-201ENST00000314289 ZYG11BQ9C0D3 744 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 SIRPGQ9P1W8 387 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 LRRC42Q9Y546 428 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 AURKAO14965 403 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 GJB5O95377 273 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 HOXC13P31276 330 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 CPA2P48052 419 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 AQP5P55064 265 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 GPR17Q13304 367 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 GRM3Q14832 879 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 SPOUT1Q5T280 376 aaKnown RBP12.6□□□□□ -0.39
RNF4-201ENST00000314289 RAPH1Q70E73 1250 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 CYS1Q717R9 158 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 FBXO22Q8NEZ5 403 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 AUTS2Q8WXX7 1259 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
RNF4-201ENST00000314289 TSGA13Q96PP4 275 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 EBF4Q9BQW3 602 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 PIDD1Q9HB75 910 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 TLR8Q9NR97 1041 aaKnown RBP12.6□□□□□ -0.39
RNF4-201ENST00000314289 SOX13Q9UN79 622 aa12.6□□□□□ -0.39
RNF4-201ENST00000314289 AAR2Q9Y312 384 aaKnown RBP12.6□□□□□ -0.39
RNF4-201ENST00000314289 A0A096LPK6 155 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 ERI2A8K979 691 aaKnown RBP12.59□□□□□ -0.39
RNF4-201ENST00000314289 PLIN3O60664 434 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 DNAJB2P25686 324 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 GABRB3P28472 473 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 OR1E1P30953 314 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 ARRB2P32121 409 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 ALDH7A1P49419 539 aaKnown RBP12.59□□□□□ -0.39
RNF4-201ENST00000314289 APLP1P51693 650 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 STX3Q13277 289 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 NADSYN1Q6IA69 706 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 RNF135Q8IUD6 432 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 VPS39Q96JC1 886 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 SP110Q9HB58 689 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 GKN1Q9NS71 199 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 ARL8BQ9NVJ2 186 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 DLGAP2Q9P1A6 1054 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 MYLKQ15746 1914 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 A0A0D9SEW6 157 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 OR6C75A6NL08 312 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 PIRTP0C851 137 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 IRF1P10914 325 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 NPY2RP49146 381 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 ZNF135P52742 658 aaPredicted RBP12.59□□□□□ -0.39
RNF4-201ENST00000314289 WNT3AP56704 352 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 PCLAFQ15004 111 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 KIAA1841Q6NSI8 718 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 TIFABQ6ZNK6 161 aa12.59□□□□□ -0.39
RNF4-201ENST00000314289 LDB1Q86U70 411 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms