RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 PCDHGB4Q9UN71 923 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 PCDHGB5Q9Y5G0 923 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 MYLKQ15746 1914 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 DLX3O60479 287 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 ENO3P13929 434 aaPredicted RBP21.15■□□□□ 0.98
RELA-201ENST00000308639 ETS2P15036 469 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 CHRNA4P43681 627 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 NUMBP49757 651 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 PGFP49763 221 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 MRPS22P82650 360 aaKnown RBP21.15■□□□□ 0.98
RELA-201ENST00000308639 CCL14Q16627 93 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 ARL13BQ3SXY8 428 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 LIPMQ5VYY2 423 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 ITPRIPL1Q6GPH6 555 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 DSELQ8IZU8 1212 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 FAM156AQ8NDB6 213 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 EPAS1Q99814 870 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 DRC3Q9H069 523 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 PRDM16Q9HAZ2 1276 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 CNGB3Q9NQW8 809 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 PDP2Q9P2J9 529 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 RAP2CQ9Y3L5 183 aa21.15■□□□□ 0.98
RELA-201ENST00000308639 HDAC3O15379 428 aa21.14■□□□□ 0.98
RELA-201ENST00000308639 TCN1P20061 433 aaPredicted RBP21.14■□□□□ 0.98
RELA-201ENST00000308639 BDNFP23560 247 aa21.14■□□□□ 0.98
RELA-201ENST00000308639 NPY2RP49146 381 aa21.14■□□□□ 0.98
RELA-201ENST00000308639 CSE1LP55060 971 aaKnown RBP21.14■□□□□ 0.98
RELA-201ENST00000308639 HNRNPDQ14103 355 aaKnown RBP21.14■□□□□ 0.98
RELA-201ENST00000308639 PLEKHH3Q7Z736 793 aa21.14■□□□□ 0.98
RELA-201ENST00000308639 SCAMP5Q8TAC9 235 aa21.14■□□□□ 0.98
RELA-201ENST00000308639 DPF3Q92784 378 aa21.14■□□□□ 0.98
RELA-201ENST00000308639 FICDQ9BVA6 458 aa21.14■□□□□ 0.98
RELA-201ENST00000308639 CTSHP09668 335 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 VCLP18206 1134 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 ARNTP27540 789 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 TSTD2Q5T7W7 516 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 SNX31Q8N9S9 440 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 MYLPFQ96A32 169 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 TMEM209Q96SK2 561 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 DNAI2Q9GZS0 605 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 TRHDEQ9UKU6 1024 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 AK5Q9Y6K8 562 aa21.14■□□□□ 0.97
RELA-201ENST00000308639 NCAM2O15394 837 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 MSI1O43347 362 aaKnown RBP21.13■□□□□ 0.97
RELA-201ENST00000308639 PMPCBO75439 489 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 UQCRBP14927 111 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 CDC42EP1Q00587 391 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 MS4A2Q01362 244 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 RAB41Q5JT25 222 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 LRRC8EQ6NSJ5 796 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 ACAD11Q709F0 780 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 APLFQ8IW19 511 aaPredicted RBP21.13■□□□□ 0.97
RELA-201ENST00000308639 RHOJQ9H4E5 214 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 TMLHEQ9NVH6 421 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 C9IYK1 514 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 FBXO21O94952 628 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 PYGLP06737 847 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 HNRNPLP14866 589 aaKnown RBP eCLIP21.13■□□□□ 0.97
RELA-201ENST00000308639 CXCR3P49682 368 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 CSRP3P50461 194 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 SCNN1GP51170 649 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 GJA9P57773 515 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 MED21Q13503 144 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 MMEL1Q495T6 779 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 JADE3Q92613 823 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 NPAS2Q99743 824 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 ZCWPW1Q9H0M4 648 aa21.13■□□□□ 0.97
RELA-201ENST00000308639 CRYBB1P53674 252 aaPredicted RBP21.12■□□□□ 0.97
RELA-201ENST00000308639 CEACAM7Q14002 265 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 CNGA3Q16281 694 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 NAPEPLDQ6IQ20 393 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 B4GALNT2Q8NHY0 566 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 DQX1Q8TE96 717 aaKnown RBP21.12■□□□□ 0.97
RELA-201ENST00000308639 PTPN18Q99952 460 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 KIFC1Q9BW19 673 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 CYP4F12Q9HCS2 524 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 TLL2Q9Y6L7 1015 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 TTC36A6NLP5 189 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 ERI2A8K979 691 aaKnown RBP21.12■□□□□ 0.97
RELA-201ENST00000308639 HCAR3P49019 387 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 RNF135Q8IUD6 432 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 STYXQ8WUJ0 223 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 SREK1Q8WXA9 508 aaKnown RBP21.12■□□□□ 0.97
RELA-201ENST00000308639 NDNQ99608 321 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 ZDHHC7Q9NXF8 308 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 SFMBT1Q9UHJ3 866 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 CPA4Q9UI42 421 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 FAM95CA0A1B0GW59 222 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 RGSL1A5PLK6 1076 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 PRDX6P30041 224 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 SLC1A2P43004 574 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 ALDH1A3P47895 512 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 TIGD5Q53EQ6 642 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 ZNF789Q5FWF6 425 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 RASIP1Q5U651 963 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 DENND5AQ6IQ26 1287 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 KYQ8NBH2 561 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 TRAPPC9Q96Q05 1148 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 TBL1YQ9BQ87 522 aa21.12■□□□□ 0.97
RELA-201ENST00000308639 RTP3Q9BQQ7 232 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms