RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 RALBP11234 206 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CYP2C9P11712 490 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CCNA1P78396 465 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 GCNT1Q02742 428 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 TAF1CQ15572 869 aaPredicted RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CLIP4Q8N3C7 705 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 BPIFB6Q8NFQ5 453 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 KIF12Q96FN5 646 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 VCPIP1Q96JH7 1222 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 C16orf70Q9BSU1 422 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CPSF3Q9UKF6 684 aaKnown RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 PCDHGA3Q9Y5H0 932 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 SYNJ2BP-COX16A0A087WUM0 186 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 ZNF839A8K0R7 811 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 ACKR2O00590 384 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 AQP9O43315 295 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 FAM189A1O60320 539 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 MT-ND1P03886 318 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 ALDOAP04075 364 aaKnown RBP16.46■□□□□ 0.23
CCDC8-201ENST00000307522 MAP4P27816 1152 aaKnown RBP16.46■□□□□ 0.23
CCDC8-201ENST00000307522 DLG2Q15700 870 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 TRIM11Q96F44 468 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 ARHGAP39Q9C0H5 1083 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 DHX35Q9H5Z1 703 aaKnown RBP16.46■□□□□ 0.23
CCDC8-201ENST00000307522 CLK4Q9HAZ1 481 aaKnown RBP16.46■□□□□ 0.23
CCDC8-201ENST00000307522 COX16Q9P0S2 106 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 BPTFQ12830 3046 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 CCDC78A2IDD5 438 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 ASB14A6NK59 587 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 ZNF195O14628 629 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 MAGP20916 626 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 NR4A2P43354 598 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 TPTEP56180 551 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 RAB39AQ14964 217 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 LGSNQ5TDP6 509 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 ZBTB49Q6ZSB9 765 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 CATSPER4Q7RTX7 472 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 CAND1Q86VP6 1230 aaKnown RBP16.46■□□□□ 0.23
CCDC8-201ENST00000307522 CADM3Q8N126 398 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 TINF2Q9BSI4 451 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 NXF3Q9H4D5 531 aaKnown RBP16.46■□□□□ 0.23
CCDC8-201ENST00000307522 CAB39LQ9H9S4 337 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 AURKCQ9UQB9 309 aa16.46■□□□□ 0.23
CCDC8-201ENST00000307522 C3orf70A6NLC5 250 aaPredicted RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 AKAP10O43572 662 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ASS1P00966 412 aaKnown RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 PRDX6P30041 224 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ROR1Q01973 937 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 TNFAIP2Q03169 654 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 SLC10A6Q3KNW5 377 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ZNF792Q3KQV3 632 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 DRICH1Q6PGQ1 229 aaPredicted RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 DCLRE1AQ6PJP8 1040 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 IGFN1Q86VF2 1251 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 NDRG1Q92597 394 aaKnown RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 FAM167AQ96KS9 214 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 MAGEB5Q9BZ81 275 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 TRIM8Q9BZR9 551 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 MUC3BQ9H195 1237 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 TCF7L2Q9NQB0 619 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 GID8Q9NWU2 228 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 FETUBQ9UGM5 382 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 SNX9Q9Y5X1 595 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 RANBP2P49792 3224 aaKnown RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 MEIS3P2A8K0S8 358 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 AGRPO00253 132 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 TREHO43280 583 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 PGK1P00558 417 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 APOEP02649 317 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ME2P23368 584 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 RBL1P28749 1068 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 CRHR1P34998 444 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 PAN2Q504Q3 1202 aaKnown RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 PIGGQ5H8A4 983 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ANKRD26P1Q6NSI1 321 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 PLD6Q8N2A8 252 aaKnown RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 TMEM40Q8WWA1 233 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ANKRD36BP1Q96IX9 119 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 AP4S1Q9Y587 144 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 PTPRFP10586 1907 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 OTOFQ9HC10 1997 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 H0YCG3 227 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 HTRA2O43464 458 aaPredicted RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 LRCH4O75427 683 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 IL1BP01584 269 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ERBB2P04626 1255 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 NUMBP49757 651 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 EFNA5P52803 228 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 SESN2P58004 480 aaPredicted RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ABCE1P61221 599 aaKnown RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ZNF618Q5T7W0 954 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 WDTC1Q8N5D0 677 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 SLC4A11Q8NBS3 891 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 CXorf38Q8TB03 319 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 ZMAT2Q96NC0 199 aaKnown RBP16.45■□□□□ 0.22
CCDC8-201ENST00000307522 SERPINI1Q99574 410 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 HIPK3Q9H422 1215 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 V9GYQ6 96 aa16.45■□□□□ 0.22
CCDC8-201ENST00000307522 PRSS51A0A1B0GVH4 220 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms