RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ACADLP28330 430 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 OR1D2P34982 312 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ARL2P36404 184 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 GRIK5Q16478 980 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CASP12Q6UXS9 341 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CXorf40AQ8TE69 158 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 SEMA6BQ9H3T3 888 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TAS2R13Q9NYV9 303 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 MBD2Q9UBB5 411 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 RUVBL2Q9Y230 463 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ASTN2O75129 1339 aaPredicted RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 RB1P06400 928 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 PRKCIP41743 596 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TTPAP49638 278 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 PEX5P50542 639 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 BLKP51451 505 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 E2F4Q16254 413 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CYP2A13Q16696 494 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 PAGE2BQ5JRK9 111 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 SPANXN3Q5MJ09 141 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 HASPINQ8TF76 798 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 VPS45Q9NRW7 570 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TRIM10Q9UDY6 481 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM153AQ9UHL3 310 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 PCDHA11Q9Y5I1 949 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TCP11X1B4DZS4 312 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 SPTLC1O15269 473 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 AVILO75366 819 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 RPL3P39023 403 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 NUDT2P50583 147 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 YBEYP58557 167 aaPredicted RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ACTN3Q08043 901 aaPredicted RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 BTN2A1Q7KYR7 527 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM20CQ8IXL6 584 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TNS4Q8IZW8 715 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CDCA3Q99618 268 aaPredicted RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 KLHL25Q9H0H3 589 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 FNIP2Q9P278 1114 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TBC1D30Q9Y2I9 924 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TRPM6Q9BX84 2022 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC25A12O75746 678 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 DNTTP04053 509 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 PLEKP08567 350 aaPredicted RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TSC22D1Q15714 1073 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ATP6AP1LQ52LC2 224 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 LDLRAD1Q5T700 205 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TTC33Q6PID6 262 aaPredicted RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CEP44Q9C0F1 390 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TDRKHQ9Y2W6 561 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TNPO3Q9Y5L0 923 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 APOC4-APOC2K7ER74 178 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TREHO43280 583 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CPSF4O95639 269 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 APOC2P02655 101 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 SMPD1P17405 629 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 POU1F1P28069 291 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ARMC4Q5T2S8 1044 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF697Q5TEC3 545 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TYW3Q6IPR3 259 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 MOB2Q70IA6 237 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TRIM63Q969Q1 353 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ING3Q9NXR8 418 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 LRRC72A6NJI9 287 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 RAD51BO15315 384 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TLR5O60602 858 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 KLHL18O94889 574 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CCNDBP1O95273 360 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 FTH1P02794 183 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 MYL12AP19105 171 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 MTHFRP42898 656 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 RAD23AP54725 363 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 MAMDC4Q6UXC1 1216 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 LRRC74BQ6ZQY2 392 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TRAPPC12Q8WVT3 735 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ACDQ96AP0 544 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 PNMA5Q96PV4 448 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 PLXNA1Q9UIW2 1896 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM25AB3EWG3 89 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM25CB3EWG5 89 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM25GB3EWG6 89 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 HLA-DQA2P01906 255 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TPBGLP0DKB5 382 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 ALPPL2P10696 532 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 FGFR4P22455 802 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 CSNK2BP67870 215 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 SPIDRQ14159 915 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 TSNQ15631 228 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 RPTNQ6XPR3 784 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 KATNAL2Q8IYT4 538 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 EPB41L4BQ9H329 900 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 NT5MQ9NPB1 228 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 MRPL39Q9NYK5 338 aaKnown RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 UNC13CQ8NB66 2214 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 DDX60LQ5H9U9 1706 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 TRDMT1O14717 391 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 HOXC12P31275 282 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 SMTNL2Q2TAL5 461 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC30A9Q6PML9 568 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms