RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 MED4Q9NPJ6 270 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TDP1Q9NUW8 608 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 VPS18Q9P253 973 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 SLC17A6Q9P2U8 582 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 LSM7Q9UK45 103 aaKnown RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 INTS6Q9UL03 887 aaKnown RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 MRPS23Q9Y3D9 190 aaKnown RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 COL4A3Q01955 1670 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 A0A087WUV0 522 aaPredicted RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TCRBV9S1A1TA0A576 114 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 E2F8A0AVK6 867 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 H0Y626 953 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 K7ERQ8 282 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 CBX4O00257 560 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 RASGRF2O14827 1237 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TRIM24O15164 1050 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 OPA1O60313 960 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 PMPCBO75439 489 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 FAM155BO75949 473 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 FGF19O95750 216 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 MT-CO1P00395 513 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 F7P08709 466 aaPredicted RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 CREB1P16220 341 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 DDX6P26196 483 aaKnown RBP eCLIP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 CD86P42081 329 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 IFNAR2P48551 515 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 OXCT1P55809 520 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 LMAN2Q12907 356 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 PCSK7Q16549 785 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 ANO4Q32M45 955 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TNFAIP8L3Q5GJ75 292 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 FAM78AQ5JUQ0 283 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 C6orf118Q5T5N4 469 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TMCO4Q5TGY1 634 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 MARC1Q5VT66 337 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TTC39BQ5VTQ0 682 aaPredicted RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 PPP1R21Q6ZMI0 780 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 NPAS3Q8IXF0 933 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 ATP11CQ8NB49 1132 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 DDI1Q8WTU0 396 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 MYLIPQ8WY64 445 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TLCD1Q96CP7 247 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 EXOC2Q96KP1 924 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 ATP6V1G3Q96LB4 118 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TTC25Q96NG3 672 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 EBNA1BP2Q99848 306 aaKnown RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 DDX50Q9BQ39 737 aaKnown RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 TBL1YQ9BQ87 522 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 FERMT1Q9BQL6 677 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 FEM1AQ9BSK4 669 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 MUC3BQ9H195 1237 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 SLC25A51Q9H1U9 297 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 SFXN1Q9H9B4 322 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 IL1RAPL1Q9NZN1 696 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 BCCIPQ9P287 314 aaKnown RBP eCLIP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 ZC3H7BQ9UGR2 993 aaKnown RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 VPS51Q9UID3 782 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 NOVA2Q9UNW9 492 aaKnown RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 MAD1L1Q9Y6D9 718 aa5.87□□□□□ -1.47
TTC39C-201ENST00000304621 NUP210Q8TEM1 1887 aaPredicted RBP5.87□□□□□ -1.47
TTC39C-201ENST00000304621 MYO18AQ92614 2054 aaKnown RBP5.86□□□□□ -1.47
TTC39C-201ENST00000304621 CCDC78A2IDD5 438 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 GOLGA8KD6RF30 607 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 POC1B-GALNT4F8VUJ3 575 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 TCEA3O75764 348 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 MYZAPP0CAP1 466 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 MLNP12872 115 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 FCARP24071 287 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 CTSOP43234 321 aaPredicted RBP5.86□□□□□ -1.47
TTC39C-201ENST00000304621 RENBPP51606 427 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 EIF3BP55884 814 aaKnown RBP5.86□□□□□ -1.47
TTC39C-201ENST00000304621 WNT3AP56704 352 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 CDK16Q00536 496 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 ITKQ08881 620 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 MSLNQ13421 630 aaPredicted RBP5.86□□□□□ -1.47
TTC39C-201ENST00000304621 MPPE1Q53F39 396 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 DNAJC21Q5F1R6 531 aaKnown RBP5.86□□□□□ -1.47
TTC39C-201ENST00000304621 ARSIQ5FYB1 569 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 LY6G5CQ5SRR4 150 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 AGBL2Q5U5Z8 902 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 STEAP4Q687X5 459 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 TRIM68Q6AZZ1 485 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 ANKRD54Q6NXT1 300 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 GET4Q7L5D6 327 aaPredicted RBP5.86□□□□□ -1.47
TTC39C-201ENST00000304621 MFN1Q8IWA4 741 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 PALM2Q8IXS6 379 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 LEMD2Q8NC56 503 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 VOPP1Q96AW1 172 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 ZNF778Q96MU6 729 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 SMIM14Q96QK8 99 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 SEMA3CQ99985 751 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 MGME1Q9BQP7 344 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 DHRS4Q9BTZ2 278 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 FRMD8Q9BZ67 464 aaPredicted RBP5.86□□□□□ -1.47
TTC39C-201ENST00000304621 RETREG1Q9H6L5 497 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 LRRC40Q9H9A6 602 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 XAB2Q9HCS7 855 aaKnown RBP5.86□□□□□ -1.47
TTC39C-201ENST00000304621 CLEC1BQ9P126 229 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 LHX3Q9UBR4 397 aa5.86□□□□□ -1.47
TTC39C-201ENST00000304621 UBA2Q9UBT2 640 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms