RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 CAPNS1P04632 268 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 PLEKP08567 350 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 FERP16591 822 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 HNRNPA2B1P22626 353 aaKnown RBP16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 RFC1P35251 1148 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 HDAC4P56524 1084 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 POLD3Q15054 466 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 PRAMEF14Q5SWL7 426 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 SFMBT2Q5VUG0 894 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 KIAA1161Q6NSJ0 714 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 DNAJC24Q6P3W2 148 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 NLRP14Q86W24 1093 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 TMPRSS12Q86WS5 348 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 CHST14Q8NCH0 376 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 CNDP2Q96KP4 475 aaKnown RBP16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 PCDHB18PQ96TA0 734 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 AGPAT1Q99943 283 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 SEPT11Q9NVA2 429 aaKnown RBP16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 DKK4Q9UBT3 224 aa16.99■□□□□ 0.31
TRAPPC1-201ENST00000303731 AP1G1O43747 822 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 LRIG2O94898 1065 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 PCDH8O95206 1070 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 GSRP00390 522 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 L1CAMP32004 1257 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 HNF1BP35680 557 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 DNA2P51530 1060 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 CCNHP51946 323 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 ZNF143P52747 638 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 RPS21P63220 83 aaKnown RBP16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 ILKQ13418 452 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 ZNF284Q2VY69 593 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 EFHC2Q5JST6 749 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 FBXL19Q6PCT2 694 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 WDR59Q6PJI9 974 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 MON1BQ7L1V2 547 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 SLFN11Q7Z7L1 901 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 SPATS2Q86XZ4 545 aaKnown RBP16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 DCP2Q8IU60 420 aaKnown RBP16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 CASKIN2Q8WXE0 1202 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 ARHGEF2Q92974 986 aaKnown RBP16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 RAB7BQ96AH8 199 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 FEM1CQ96JP0 617 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 DONSONQ9NYP3 566 aa16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 ARID1BQ8NFD5 2236 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC1-201ENST00000303731 APC2O95996 2303 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 SLC31A1O15431 190 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 RFPL3O75679 317 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 THEGLP0DJG4 465 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 ADRB3P13945 408 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 SNRPD1P62314 119 aaKnown RBP16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 NCAPHQ15003 741 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 TMEM259Q4ZIN3 620 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 HS1BP3Q53T59 392 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 APTXQ7Z2E3 356 aaKnown RBP16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 PHLDB2Q86SQ0 1253 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 EID2Q8N6I1 236 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 CCDC185Q8N715 623 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 ARHGEF26Q96DR7 871 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 IFT43Q96FT9 208 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 VCPIP1Q96JH7 1222 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 EPAS1Q99814 870 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 BPIFA3Q9BQP9 254 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 OSBPL1AQ9BXW6 950 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 KLHL11Q9NVR0 708 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 DNAI1Q9UI46 699 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 NEU3Q9UQ49 428 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 FCF1Q9Y324 198 aaKnown RBP16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 HS3ST3A1Q9Y663 406 aa16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 DSPP15924 2871 aaKnown RBP16.97■□□□□ 0.31
TRAPPC1-201ENST00000303731 HTR7P34969 479 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 ACVRL1P37023 503 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 YBEYP58557 167 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 TYRO3Q06418 890 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 RAB6CQ53S08 254 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 KANSL1Q7Z3B3 1105 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 ABI3BPQ7Z7G0 1075 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 AOPEPQ8N6M6 819 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 PDCD7Q8N8D1 485 aaKnown RBP16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 RTL3Q8N8U3 475 aaKnown RBP16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 OR2AP1Q8NGE2 309 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 CNPY3Q9BT09 278 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 RAB6CQ9H0N0 254 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 HSD3B7Q9H2F3 369 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 ZDHHC6Q9H6R6 413 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 CATSPERBQ9H7T0 1116 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 NDFIP2Q9NV92 336 aa16.96■□□□□ 0.31
TRAPPC1-201ENST00000303731 ZFYVE26Q68DK2 2539 aa16.96■□□□□ 0.3
TRAPPC1-201ENST00000303731 TCRBV5S1A1TA0A578 114 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 A6NNZ2 444 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 SMTNL1A8MU46 457 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 FAM72CH0Y354 149 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 FGF10O15520 208 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 CCP110O43303 1012 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 TSPAN6O43657 245 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 KDELR3O43731 214 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 GJB6O95452 261 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 POP4O95707 220 aaKnown RBP16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 CD160O95971 181 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 PRLRP16471 622 aa16.95■□□□□ 0.3
TRAPPC1-201ENST00000303731 CKMT2P17540 419 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms