RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 NELL1Q92832 810 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 PTPRN2Q92932 1015 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 CELF6Q96J87 481 aaKnown RBP9□□□□□ -0.97
VPREB1-201ENST00000302273 GDAP1L1Q96MZ0 367 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 OSBPL9Q96SU4 736 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 CD248Q9HCU0 757 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 PRSS16Q9NQE7 514 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 RBM12Q9NTZ6 932 aaKnown RBP9□□□□□ -0.97
VPREB1-201ENST00000302273 ETNK2Q9NVF9 386 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 SPATA6Q9NWH7 488 aaPredicted RBP9□□□□□ -0.97
VPREB1-201ENST00000302273 PPM1HQ9ULR3 514 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 PACSIN2Q9UNF0 486 aaPredicted RBP9□□□□□ -0.97
VPREB1-201ENST00000302273 WDR87Q6ZQQ6 2873 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 USP34Q70CQ2 3546 aa9□□□□□ -0.97
VPREB1-201ENST00000302273 TECTAO75443 2155 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 GOLGA6L10A0A0M3HER8 536 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 C1QTNF3-AMACRE9PGA6 284 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 J3KR12 359 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 FANCGO15287 622 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 SLC7A4O43246 635 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 MFSD11O43934 449 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 CEP104O60308 925 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 ZNF821O75541 412 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 TMCC1O94876 653 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 IGSF6O95976 241 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 ADH1BP00325 375 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 MT-CO1P00395 513 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 PDGFBP01127 241 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 EPOP01588 193 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 FGGP02679 453 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 ITGAVP06756 1048 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 DCNP07585 359 aaKnown RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 CA4P22748 312 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 NFKBIAP25963 317 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 OXTRP30559 389 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 PAFAH1B1P43034 410 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 CTSOP43234 321 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 MMP13P45452 471 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 SEC13P55735 322 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 RPL26P61254 145 aaKnown RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 POLR2LP62875 67 aaKnown RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 GAS6Q14393 721 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 MYLK3Q32MK0 819 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 TTC31Q49AM3 519 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 TEX44Q53QW1 395 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 SPDYCQ5MJ68 293 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 KAZNQ674X7 775 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 ZNF776Q68DI1 518 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 HEATR6Q6AI08 1181 aaKnown RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 C22orf39Q6P5X5 142 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 TMEM105Q8N8V8 129 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 CCNYQ8ND76 341 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 TSTD1Q8NFU3 115 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 SLC35B2Q8TB61 432 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 CYB5D2Q8WUJ1 264 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 HTR3CQ8WXA8 447 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 SORCS1Q8WY21 1168 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 PRCCQ92733 491 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 RAB7BQ96AH8 199 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 FAM122AQ96E09 287 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 PPP1R16AQ96I34 528 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 RPL10LQ96L21 214 aaKnown RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 RUNDC3BQ96NL0 473 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 SRPK1Q96SB4 655 aaKnown RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 ACOX2Q99424 681 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 IL12RB2Q99665 862 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 MGME1Q9BQP7 344 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 HEPHQ9BQS7 1158 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 CINPQ9BW66 212 aaPredicted RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 HEMGNQ9BXL5 484 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 POLR1EQ9GZS1 481 aaKnown RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 PCED1AQ9H1Q7 454 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 KDM4CQ9H3R0 1056 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 ITM2CQ9NQX7 267 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 VPS45Q9NRW7 570 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 CACNA2D2Q9NY47 1150 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 DKK3Q9UBP4 350 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 FZD4Q9ULV1 537 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 RPL26L1Q9UNX3 145 aaKnown RBP8.99□□□□□ -0.97
VPREB1-201ENST00000302273 MUC6Q6W4X9 2439 aa8.99□□□□□ -0.97
VPREB1-201ENST00000302273 C5orf60A6NFR6 353 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 TTC34A8MYJ7 566 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 K7ESF4 209 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 PGRMC1O00264 195 aaKnown RBP8.98□□□□□ -0.97
VPREB1-201ENST00000302273 ENC1O14682 589 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 OPHN1O60890 802 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 SOCS5O75159 536 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 NEBLO76041 1014 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 ATP1A1P05023 1023 aaKnown RBP8.98□□□□□ -0.97
VPREB1-201ENST00000302273 RBP3P10745 1247 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 CR2P20023 1033 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 PRKCHP24723 683 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 CASQ1P31415 396 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 CHRNA3P32297 505 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 EIF3EP60228 445 aaKnown RBP8.98□□□□□ -0.97
VPREB1-201ENST00000302273 RHOAP61586 193 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 DYNLT1P63172 113 aa8.98□□□□□ -0.97
VPREB1-201ENST00000302273 OTUD4Q01804 1114 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms