RNA–Protein interactions for RNA: ENST00000301897.5

CCDC88B-201, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 870 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-201ENST00000301897 LY6G6EA0A0G2JKS1 128 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 ILVBLA1L0T0 632 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 DRGXA6NNA5 263 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 K7ERQ8 282 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 TPP1O14773 563 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 KLK10O43240 276 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 AQP9O43315 295 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 SMAD6O43541 496 aaKnown RBP15.08■□□□□ 0
CCDC88B-201ENST00000301897 LEFTY1O75610 366 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 TCEA3O75764 348 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 CNTN5O94779 1100 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 ADRB3P13945 408 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 OR1E1P30953 314 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 GGCXP38435 758 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 RPIAP49247 311 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 SGCGQ13326 291 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 FZD2Q14332 565 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 ARHGAP44Q17R89 818 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 ISXQ2M1V0 245 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 SEL1L3Q68CR1 1132 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 GBP6Q6ZN66 633 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 RBM44Q6ZP01 1051 aaKnown RBP15.08■□□□□ 0
CCDC88B-201ENST00000301897 CHST14Q8NCH0 376 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 BTN2A2Q8WVV5 523 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 SHC3Q92529 594 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 RAB7BQ96AH8 199 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 VCPIP1Q96JH7 1222 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 BMFQ96LC9 184 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 LENG8Q96PV6 779 aaPredicted RBP15.08■□□□□ 0
CCDC88B-201ENST00000301897 HEPHQ9BQS7 1158 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 OSBPL2Q9H1P3 480 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 CPNE5Q9HCH3 593 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 ACP6Q9NPH0 428 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 PIGVQ9NUD9 493 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC88B-201ENST00000301897 PCDHGA8Q9Y5G5 932 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 U3KQA8 63 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 RP1P56715 2156 aa15.08■□□□□ 0
CCDC88B-201ENST00000301897 AHCTF1Q8WYP5 2266 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 CXorf51AA0A1B0GTR3 108 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 GTPBP10A4D1E9 387 aaKnown RBP15.07■□□□□ 0
CCDC88B-201ENST00000301897 BECN2A8MW95 431 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 FPGTO14772 594 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 ADCY5O95622 1261 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 C6P13671 934 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 L1CAMP32004 1257 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 SCNN1AP37088 669 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
CCDC88B-201ENST00000301897 MORC3Q14149 939 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 ALFQ53S48 1182 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 DPY19L3Q6ZPD9 716 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 PASD1Q8IV76 773 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 DENND6BQ8NEG7 585 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 ASB12Q8WXK4 309 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 NAT6Q93015 286 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 SLC46A1Q96NT5 459 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 NPY6RQ99463 290 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 IL12RB2Q99665 862 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 CRACR2AQ9BSW2 395 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 FADS3Q9Y5Q0 445 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 WASF2Q9Y6W5 498 aa15.07■□□□□ 0
CCDC88B-201ENST00000301897 IGLV3-10A0A075B6K4 115 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 A0A0D9SEW6 157 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 CPED1A4D0V7 1026 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 EME2A4GXA9 379 aaPredicted RBP15.06■□□□□ 0
CCDC88B-201ENST00000301897 POM121BA6NF01 834 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 TSPAN6O43657 245 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 NEBLO76041 1014 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 PAK4O96013 591 aaPredicted RBP15.06■□□□□ 0
CCDC88B-201ENST00000301897 ERBB2P04626 1255 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 BMP6P22004 513 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 ETFBP38117 255 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 SERPINH1P50454 418 aaKnown RBP15.06■□□□□ 0
CCDC88B-201ENST00000301897 STX17P56962 302 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 BPIFB4P59827 614 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 DEUP1Q05D60 604 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 NR0B2Q15466 257 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 EXOC3L4Q17RC7 722 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 ZNF542PQ5EBM4 170 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 C3orf38Q5JPI3 329 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 LINGO4Q6UY18 593 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 TFAP2DQ7Z6R9 452 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 PLPP6Q8IY26 295 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 ZNF683Q8IZ20 524 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 ARL14Q8N4G2 192 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 NT5C3BQ969T7 300 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 ISG20Q96AZ6 181 aaKnown RBP15.06■□□□□ 0
CCDC88B-201ENST00000301897 ARHGEF26Q96DR7 871 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 TBATAQ96M53 351 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 C1QTNF2Q9BXJ5 285 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 TNKS2Q9H2K2 1166 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 SPASTQ9UBP0 616 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 SATB2Q9UPW6 733 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 HECTD1Q9ULT8 2610 aa15.06■□□□□ 0
CCDC88B-201ENST00000301897 B8ZZF3 427 aa15.05■□□□□ -0
CCDC88B-201ENST00000301897 NEMP1O14524 444 aa15.05■□□□□ -0
CCDC88B-201ENST00000301897 JUNDP17535 347 aa15.05■□□□□ -0
CCDC88B-201ENST00000301897 TGM2P21980 687 aa15.05■□□□□ -0
CCDC88B-201ENST00000301897 SULT1E1P49888 294 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms