RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 FUT11Q495W5 492 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 CEP78Q5JTW2 689 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 C4orf22Q6V702 233 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 BNIPLQ7Z465 357 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 CDR2LQ86X02 465 aaPredicted RBP14.61□□□□□ -0.07
CDT1-201ENST00000301019 RNF135Q8IUD6 432 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 DDIASQ8IXT1 998 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 LILRB4Q8NHJ6 448 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 TFAP2BQ92481 460 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 GLMNQ92990 594 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 CERS2Q96G23 380 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 C1orf50Q9BV19 199 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 GIMAP2Q9UG22 337 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 MAST2Q6P0Q8 1798 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 C10orf71Q711Q0 1435 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 C3orf70A6NLC5 250 aaPredicted RBP14.61□□□□□ -0.07
CDT1-201ENST00000301019 CDH1P12830 882 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 MMP8P22894 467 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 OXTRP30559 389 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 PLIN5Q00G26 463 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 NSUN2Q08J23 767 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDT1-201ENST00000301019 TRPC3Q13507 836 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 CCDC81Q6ZN84 652 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 PGAM4Q8N0Y7 254 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 TMEM35BQ8NCS4 154 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 PLSCR3Q9NRY6 295 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 ADPRHL2Q9NX46 363 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 CAB39Q9Y376 341 aaPredicted RBP14.61□□□□□ -0.07
CDT1-201ENST00000301019 CDY2AQ9Y6F7 541 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 CDY1Q9Y6F8 540 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 LRRC37AA6NMS7 1700 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 MSI1O43347 362 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 TBX1O43435 398 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ICMTO60725 284 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 CST3P01034 146 aaPredicted RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 PRKCGP05129 697 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 PRKACBP22694 351 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ACAT1P24752 427 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 RPL26P61254 145 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 PCSK7Q16549 785 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 DRICH1Q6PGQ1 229 aaPredicted RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 POC5Q8NA72 575 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 BEX2Q9BXY8 128 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ANKRD60Q9BZ19 345 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 GLT8D2Q9H1C3 349 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 TASP1Q9H6P5 420 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 NEK6Q9HC98 313 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 TUFT1Q9NNX1 390 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 NEMP2A6NFY4 417 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 GLRA3O75311 464 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 MYCLP12524 364 aaPredicted RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 TFEBP19484 476 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ATP6V1B2P21281 511 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 YWHABP31946 246 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 TRPC1P48995 793 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 VBP1P61758 197 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 KRT76Q01546 638 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 HADHQ16836 314 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 TMTC4Q5T4D3 741 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 TRAF7Q6Q0C0 670 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 BBS12Q6ZW61 710 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 NEK10Q6ZWH5 1172 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ZBTB33Q86T24 672 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 EPHX4Q8IUS5 362 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 MMAAQ8IVH4 418 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 NECTIN4Q96NY8 510 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ALOXE3Q9BYJ1 711 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ATP13A3Q9H7F0 1226 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 DNMT3BQ9UBC3 853 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 FETUBQ9UGM5 382 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 PADI4Q9UM07 663 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 PRPF19Q9UMS4 504 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 PCDHGC3Q9UN70 934 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 DAGLAQ9Y4D2 1042 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 TEX28O15482 410 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 NADKO95544 446 aaPredicted RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 IL1R1P14778 569 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 MLLT3P42568 568 aaPredicted RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 GRIA4P48058 902 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 CDH8P55286 799 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 AP3B2Q13367 1082 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 UGT3A1Q6NUS8 523 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 DENND1BQ6P3S1 775 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 CCDC60Q8IWA6 550 aaPredicted RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 NATD1Q8N6N6 113 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 HM13Q8TCT9 377 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ITCHQ96J02 903 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 MUS81Q96NY9 551 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 CDK5RAP1Q96SZ6 601 aaKnown RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 TEKT3Q9BXF9 490 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 ILKAPQ9H0C8 392 aaPredicted RBP14.6□□□□□ -0.07
CDT1-201ENST00000301019 SPC25Q9HBM1 224 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 MTRRQ9UBK8 725 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 MFHAS1Q9Y4C4 1052 aa14.6□□□□□ -0.07
CDT1-201ENST00000301019 TCAF2A6NFQ2 919 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 TRIM38O00635 465 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 IDH3BO43837 385 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 IL1BP01584 269 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 GTF2E2P29084 291 aaKnown RBP14.59□□□□□ -0.07
CDT1-201ENST00000301019 TUBA4AP68366 448 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms