RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 VWA8A3KMH1 1905 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 ENPP3O14638 875 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 PRKCGP05129 697 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 ENO1P06733 434 aaKnown RBP22.26■■□□□ 1.15
TPM4-201ENST00000300933 FAM189BP81408 668 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 TIFABQ6ZNK6 161 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 C10orf107Q8IVU9 208 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 DRAXINQ8NBI3 349 aaPredicted RBP22.26■■□□□ 1.15
TPM4-201ENST00000300933 GIPC2Q8TF65 315 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 SCLYQ96I15 445 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 TUBB6Q9BUF5 446 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 UBE2OQ9C0C9 1292 aaKnown RBP22.26■■□□□ 1.15
TPM4-201ENST00000300933 PDP2Q9P2J9 529 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 SLC2A6Q9UGQ3 507 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 RAD54BQ9Y620 910 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 KCNU1A8MYU2 1149 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 J3KR12 359 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 MTSS1O43312 755 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 USP1O94782 785 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 BRMS1LQ5PSV4 323 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 DCP1BQ8IZD4 617 aaKnown RBP22.25■■□□□ 1.15
TPM4-201ENST00000300933 SLC25A41Q8N5S1 370 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 EBF4Q9BQW3 602 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 ADAM28Q9UKQ2 775 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 MYO16Q9Y6X6 1858 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 AQP5P55064 265 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 HTRA3P83110 453 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 STX3Q13277 289 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 CNPY1Q3B7I2 92 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 MANEALQ5VSG8 457 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 OCEL1Q9H607 264 aa22.25■■□□□ 1.15
TPM4-201ENST00000300933 NOL6Q9H6R4 1146 aaKnown RBP22.25■■□□□ 1.15
TPM4-201ENST00000300933 MOXD2PA6NHM9 499 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 PLIN3O60664 434 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 HAPLN1P10915 354 aaPredicted RBP22.24■■□□□ 1.15
TPM4-201ENST00000300933 AVPR1AP37288 418 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 MLLT6P55198 1093 aaPredicted RBP22.24■■□□□ 1.15
TPM4-201ENST00000300933 KDSRQ06136 332 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 TAF10Q12962 218 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 PRPSAP1Q14558 356 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 RNF19BQ6ZMZ0 732 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 MON1AQ86VX9 555 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 CFAP61Q8NHU2 1237 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 FTHL17Q9BXU8 183 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 BRD8Q9H0E9 1235 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 CATSPERBQ9H7T0 1116 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 HMX1Q9NP08 348 aaPredicted RBP22.24■■□□□ 1.15
TPM4-201ENST00000300933 PCDHB5Q9Y5E4 795 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 DNAJC6O75061 913 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 CCNCP24863 283 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 ARRB2P32121 409 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 TBX4P57082 545 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 ITKQ08881 620 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 CDH17Q12864 832 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 DUSP4Q13115 394 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 CTBP1Q13363 440 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 TBC1D25Q3MII6 688 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 RTP2Q5QGT7 225 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 PRSS55Q6UWB4 352 aaPredicted RBP22.24■■□□□ 1.15
TPM4-201ENST00000300933 SCML4Q8N228 414 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 FBXO32Q969P5 355 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 PABPC5Q96DU9 382 aaKnown RBP22.24■■□□□ 1.15
TPM4-201ENST00000300933 MYEOVQ96EZ4 313 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 RBBP8Q99708 897 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 GLOD4Q9HC38 313 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 IPO11Q9UI26 975 aaKnown RBP22.24■■□□□ 1.15
TPM4-201ENST00000300933 SLC39A10Q9ULF5 831 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 PCDHB7Q9Y5E2 793 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 GJB3O75712 270 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 RPL17P18621 184 aaKnown RBP22.24■■□□□ 1.15
TPM4-201ENST00000300933 SLC11A1P49279 550 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 LRRC36Q1X8D7 754 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 ATG16L1Q676U5 607 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 RAP1GAP2Q684P5 730 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 ESRP1Q6NXG1 681 aaKnown RBP22.24■■□□□ 1.15
TPM4-201ENST00000300933 DENND6AQ8IWF6 608 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 SPATA6LQ8N4H0 392 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 CPNE1Q99829 537 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 SCML2Q9UQR0 700 aa22.24■■□□□ 1.15
TPM4-201ENST00000300933 ARVCFO00192 962 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 VAPBO95292 243 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 ANPEPP15144 967 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 CNTFP26441 200 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 HOXD10P28358 340 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 PCLAFQ15004 111 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 CFAP157Q5JU67 520 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 C10orf120Q5SQS8 335 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 VAT1Q99536 393 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 TBL1YQ9BQ87 522 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 OXCT2Q9BYC2 517 aaPredicted RBP22.23■■□□□ 1.15
TPM4-201ENST00000300933 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.23■■□□□ 1.15
TPM4-201ENST00000300933 SQORQ9Y6N5 450 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 CASP8AP2Q9UKL3 1982 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 MATN3O15232 486 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 INPPL1O15357 1258 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 ATN1P54259 1190 aaPredicted RBP22.23■■□□□ 1.15
TPM4-201ENST00000300933 CCL23P55773 120 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 DSG1Q02413 1049 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 MPP3Q13368 585 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 ZNF460Q14592 562 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms