RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SLC5A2P31639 672 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 MTTPP55157 894 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 PPIDQ08752 370 aaKnown RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 SEPT6Q14141 434 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 GRM3Q14832 879 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 PDK3Q15120 406 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 OTUD1Q5VV17 481 aaPredicted RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 KCTD4Q8WVF5 259 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 VPS39Q96JC1 886 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TCF7L2Q9NQB0 619 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 OR12D3Q9UGF7 316 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 POMPQ9Y244 141 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 C15orf38-AP3S2A0A0A6YYH1 394 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 CASTOR2A6NHX0 329 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 I6L893 689 aaPredicted RBP13.65□□□□□ -0.22
CTDP1-202ENST00000299543 GLUD2P49448 558 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 ARPINQ7Z6K5 226 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 TINF2Q9BSI4 451 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 TMEM98Q9Y2Y6 226 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 DERAQ9Y315 318 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 PMPCBO75439 489 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 DAB1O75553 588 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 PIGNO95427 931 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 GSTT2P0CG29 244 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 GSTT2BP0CG30 244 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 ITGAXP20702 1163 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 KLF10Q13118 480 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 FSCBQ5H9T9 825 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 B3GNT6Q6ZMB0 384 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 PAQR9Q6ZVX9 377 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 DHDDSQ86SQ9 333 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 SENP8Q96LD8 212 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 CNBD2Q96M20 576 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 GAD1Q99259 594 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 ILKAPQ9H0C8 392 aaPredicted RBP13.65□□□□□ -0.22
CTDP1-202ENST00000299543 ARHGAP26Q9UNA1 814 aa13.65□□□□□ -0.22
CTDP1-202ENST00000299543 CAPN8A6NHC0 703 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 RRN3P2A6NIE6 340 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 BTBD19C9JJ37 291 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 FKBP6O75344 327 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 E2F6O75461 281 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 TOMM70O94826 608 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 VAPBO95292 243 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 AP2A1O95782 977 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 MOCS2O96007 188 aaPredicted RBP13.65□□□□□ -0.23
CTDP1-202ENST00000299543 HALP42357 657 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 LIMK2P53671 638 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 KIAA0319Q5VV43 1072 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 FAM91A1Q658Y4 838 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 GPR142Q7Z601 462 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 SLC41A1Q8IVJ1 513 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 HNRNPABQ99729 332 aaKnown RBP13.65□□□□□ -0.23
CTDP1-202ENST00000299543 ACE2Q9BYF1 805 aaPredicted RBP13.65□□□□□ -0.23
CTDP1-202ENST00000299543 CDH19Q9H159 772 aa13.65□□□□□ -0.23
CTDP1-202ENST00000299543 VCLP18206 1134 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 CRABP2P29373 138 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 PNPLA4P41247 253 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 GRIA4P48058 902 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 CD97P48960 835 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 KPNA1P52294 538 aaPredicted RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 ARL13BQ3SXY8 428 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 CCDC153Q494R4 210 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 ACAD11Q709F0 780 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 DENND6AQ8IWF6 608 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 C17orf50Q8WW18 174 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 MAML3Q96JK9 1138 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 CDRT15Q96T59 188 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 COL1A2P08123 1366 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 BRCA2P51587 3418 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 DYTNA2CJ06 578 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 DCLK1O15075 740 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 MT-CO1P00395 513 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 CD68P34810 354 aaPredicted RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 TMED10P49755 219 aaKnown RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 DCTN2Q13561 401 aaKnown RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 CCNIQ14094 377 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 PCSK7Q16549 785 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 ARL13AQ5H913 290 aaPredicted RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 TMEM214Q6NUQ4 689 aaKnown RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 ARHGAP36Q6ZRI8 547 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 UTS2BQ765I0 119 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 ZNF354CQ86Y25 554 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 PDSS2Q86YH6 399 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 CLIP3Q96DZ5 547 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 TMA16Q96EY4 203 aaKnown RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 PCED1BQ96HM7 432 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 PRICKLE1Q96MT3 831 aaPredicted RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 MLPHQ9BV36 600 aaPredicted RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 FTHL17Q9BXU8 183 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 MRPL1Q9BYD6 325 aaKnown RBP13.64□□□□□ -0.23
CTDP1-202ENST00000299543 ABHD16BQ9H3Z7 469 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 PTTG2Q9NZH5 202 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 WDR37Q9Y2I8 494 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
CTDP1-202ENST00000299543 ZCWPW2A0A1B0GU75 182 aa13.63□□□□□ -0.23
CTDP1-202ENST00000299543 LRIG2O94898 1065 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms