RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 ASIC2Q16515 512 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 MEA1Q16626 185 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 TBC1D3GQ6DHY5 549 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 TBC1D3CQ6IPX1 549 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 ZCCHC8Q6NZY4 707 aaKnown RBP16.05■□□□□ 0.16
UBXN1-201ENST00000294119 FOXR1Q6PIV2 292 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 TICAM1Q8IUC6 712 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 TMTC1Q8IUR5 882 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 LRRC8AQ8IWT6 810 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 TBC1D3Q8IZP1 549 aaPredicted RBP16.05■□□□□ 0.16
UBXN1-201ENST00000294119 UBR7Q8N806 425 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 MIB2Q96AX9 1013 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 MARCH2Q9P0N8 246 aa16.05■□□□□ 0.16
UBXN1-201ENST00000294119 INTS6Q9UL03 887 aaKnown RBP16.05■□□□□ 0.16
UBXN1-201ENST00000294119 RNF225M0QZC1 329 aaPredicted RBP16.04■□□□□ 0.16
UBXN1-201ENST00000294119 GFPT2O94808 682 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 PAEPP09466 180 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 KRT5P13647 590 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 FECHP22830 423 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 PSMD8P48556 350 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 CYP4F2P78329 520 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 MPP7Q5T2T1 576 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 EFL1Q7Z2Z2 1120 aaKnown RBP16.04■□□□□ 0.16
UBXN1-201ENST00000294119 VPS36Q86VN1 386 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 ZNF677Q86XU0 584 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 KAT5Q92993 513 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 ELMO3Q96BJ8 720 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 TMA16Q96EY4 203 aaKnown RBP16.04■□□□□ 0.16
UBXN1-201ENST00000294119 GPR27Q9NS67 375 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 FAM49BQ9NUQ9 324 aa16.04■□□□□ 0.16
UBXN1-201ENST00000294119 ADGRG4Q8IZF6 3080 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 CELSR1Q9NYQ6 3014 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 SLC12A8A0AV02 714 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 NEMP2A6NFY4 417 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 PLD2O14939 933 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 SLC7A4O43246 635 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 LATS1O95835 1130 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 ASLP04424 464 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 CD58P19256 250 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 MZF1P28698 734 aaPredicted RBP16.03■□□□□ 0.16
UBXN1-201ENST00000294119 MAT2AP31153 395 aaKnown RBP16.03■□□□□ 0.16
UBXN1-201ENST00000294119 USP8P40818 1118 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 METAP1P53582 386 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 KLHL30Q0D2K2 578 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 EIF3IQ13347 325 aaKnown RBP16.03■□□□□ 0.16
UBXN1-201ENST00000294119 CDKN3Q16667 212 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 TMEM270Q6UE05 265 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 IRF2BP2Q7Z5L9 587 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 DTX1Q86Y01 620 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 SLC22A18ASQ8N1D0 253 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 BAG1Q99933 345 aaPredicted RBP16.03■□□□□ 0.16
UBXN1-201ENST00000294119 IRX2Q9BZI1 471 aaPredicted RBP16.03■□□□□ 0.16
UBXN1-201ENST00000294119 NCKIPSDQ9NZQ3 722 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 AJAP1Q9UKB5 411 aaPredicted RBP16.03■□□□□ 0.16
UBXN1-201ENST00000294119 PLAAQ9Y263 795 aa16.03■□□□□ 0.16
UBXN1-201ENST00000294119 EDDM13A0A1B0GTR0 161 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 SSU72P8A0A1W2PR75 194 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 TTC34A8MYJ7 566 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 NTN3O00634 580 aaPredicted RBP16.02■□□□□ 0.16
UBXN1-201ENST00000294119 NVLO15381 856 aaKnown RBP16.02■□□□□ 0.16
UBXN1-201ENST00000294119 NEBLO76041 1014 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 UGT1A5P35504 534 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 ST8SIA6P61647 398 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
UBXN1-201ENST00000294119 STILQ15468 1287 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 SETMARQ53H47 684 aaPredicted RBP16.02■□□□□ 0.16
UBXN1-201ENST00000294119 PERM1Q5SV97 790 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 ADGRF1Q5T601 910 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 CCDC170Q8IYT3 715 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 WDR48Q8TAF3 677 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 PTPRN2Q92932 1015 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 CYFIP2Q96F07 1278 aa16.02■□□□□ 0.16
UBXN1-201ENST00000294119 SETD2Q9BYW2 2564 aaPredicted RBP16.01■□□□□ 0.15
UBXN1-201ENST00000294119 MED7O43513 233 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 RTN2O75298 545 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 SRPRAP08240 638 aaKnown RBP16.01■□□□□ 0.15
UBXN1-201ENST00000294119 ADORA2BP29275 332 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 CLCN1P35523 988 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 CSKP41240 450 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 KCNAB2Q13303 367 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 MANEAQ5SRI9 462 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 AGBL4Q5VU57 503 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 WDR59Q6PJI9 974 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.01■□□□□ 0.15
UBXN1-201ENST00000294119 VASH2Q86V25 355 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 STK40Q8N2I9 435 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 TRIM44Q96DX7 344 aaPredicted RBP16.01■□□□□ 0.15
UBXN1-201ENST00000294119 HEXIM2Q96MH2 286 aaKnown RBP16.01■□□□□ 0.15
UBXN1-201ENST00000294119 TWNKQ96RR1 684 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 SALL4Q9UJQ4 1053 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 STRIP2Q9ULQ0 834 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 CSNK1G3Q9Y6M4 447 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 MED13Q9UHV7 2174 aa16.01■□□□□ 0.15
UBXN1-201ENST00000294119 CPED1A4D0V7 1026 aa16■□□□□ 0.15
UBXN1-201ENST00000294119 VDRP11473 427 aa16■□□□□ 0.15
UBXN1-201ENST00000294119 CYLC1P35663 651 aaPredicted RBP16■□□□□ 0.15
UBXN1-201ENST00000294119 RAD23BP54727 409 aa16■□□□□ 0.15
UBXN1-201ENST00000294119 SLC8A3P57103 927 aa16■□□□□ 0.15
UBXN1-201ENST00000294119 ELAVL3Q14576 367 aaKnown RBP16■□□□□ 0.15
UBXN1-201ENST00000294119 POM121L1PQ3SYA9 428 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms