RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ARHGAP18Q8N392 663 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 NXNL1Q96CM4 212 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 RHOJQ9H4E5 214 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 ZNF385DQ9H6B1 395 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 WDCPQ9H6R7 721 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 COPS7BQ9H9Q2 264 aaPredicted RBP17.09■□□□□ 0.33
CHRNE-201ENST00000293780 UBAP1Q9NZ09 502 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 XPR1Q9UBH6 696 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 C15orf38-AP3S2A0A0A6YYH1 394 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 TARM1B6A8C7 271 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 CABYRO75952 493 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 DDHD2O94830 711 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 PPARGP37231 505 aaPredicted RBP17.09■□□□□ 0.33
CHRNE-201ENST00000293780 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
CHRNE-201ENST00000293780 PRKAA1Q13131 559 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 ARPINQ7Z6K5 226 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 CPSF7Q8N684 471 aaKnown RBP17.09■□□□□ 0.33
CHRNE-201ENST00000293780 STYXQ8WUJ0 223 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 DPF3Q92784 378 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 SGF29Q96ES7 293 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 ZNF419Q96HQ0 510 aaPredicted RBP17.09■□□□□ 0.33
CHRNE-201ENST00000293780 MAML3Q96JK9 1138 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 NPAS2Q99743 824 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 KIFC1Q9BW19 673 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 SUDS3Q9H7L9 328 aaPredicted RBP17.09■□□□□ 0.33
CHRNE-201ENST00000293780 PRPF19Q9UMS4 504 aaKnown RBP17.09■□□□□ 0.33
CHRNE-201ENST00000293780 CDYLQ9Y232 598 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 ANKRD6Q9Y2G4 727 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 RAD54BQ9Y620 910 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 DNAJA2O60884 412 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 PGK1P00558 417 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 PABPC4LP0CB38 370 aaKnown RBP17.08■□□□□ 0.33
CHRNE-201ENST00000293780 SRGAP2BP0DMP2 458 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 ARSAP15289 507 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 SLC12A1Q13621 1099 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 GK3PQ14409 553 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 ARL13BQ3SXY8 428 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 TSTD2Q5T7W7 516 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 LRRC8EQ6NSJ5 796 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 FAM35AQ86V20 835 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 LILRA2Q8N149 483 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 CCNYL1Q8N7R7 359 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 FAM156AQ8NDB6 213 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 NCSTNQ92542 709 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 SENP8Q96LD8 212 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 TSNARE1Q96NA8 513 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 SERPINI1Q99574 410 aa17.08■□□□□ 0.33
CHRNE-201ENST00000293780 C6orf203Q9P0P8 240 aaPredicted RBP17.08■□□□□ 0.33
CHRNE-201ENST00000293780 PDHXO00330 501 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 VAPBO95292 243 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 APOA4P06727 396 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 TCN1P20061 433 aaPredicted RBP17.08■□□□□ 0.32
CHRNE-201ENST00000293780 AXLP30530 894 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 AIF1P55008 147 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 CDC42EP1Q00587 391 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 ESRP1Q6NXG1 681 aaKnown RBP17.08■□□□□ 0.32
CHRNE-201ENST00000293780 BHLHA9Q7RTU4 235 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 BHLHE22Q8NFJ8 381 aaPredicted RBP17.08■□□□□ 0.32
CHRNE-201ENST00000293780 GPR78Q96P69 363 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 BTBD9Q96Q07 612 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 EPAS1Q99814 870 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 SLC2A6Q9UGQ3 507 aa17.08■□□□□ 0.32
CHRNE-201ENST00000293780 COPG1Q9Y678 874 aaKnown RBP17.08■□□□□ 0.32
CHRNE-201ENST00000293780 MBLAC1A4D2B0 266 aaPredicted RBP17.07■□□□□ 0.32
CHRNE-201ENST00000293780 C9IYK1 514 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 DFFAO00273 331 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 PMLP29590 882 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 GJA9P57773 515 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 FAM219BQ5XKK7 198 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 NAPEPLDQ6IQ20 393 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 KDELC2Q7Z4H8 507 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 RDH11Q8TC12 318 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 LRGUKQ96M69 825 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 TINF2Q9BSI4 451 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 WDR41Q9HAD4 459 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 MID2Q9UJV3 735 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 MTSS1O43312 755 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 SMIM18P0DKX4 95 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 PRPSAP1Q14558 356 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 RWDD4Q6NW29 188 aaKnown RBP17.07■□□□□ 0.32
CHRNE-201ENST00000293780 GPR142Q7Z601 462 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 IPMKQ8NFU5 416 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 NPLOC4Q8TAT6 608 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 TMA16Q96EY4 203 aaKnown RBP17.07■□□□□ 0.32
CHRNE-201ENST00000293780 BRD8Q9H0E9 1235 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 ZBTB26Q9HCK0 441 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 DMAP1Q9NPF5 467 aaPredicted RBP17.07■□□□□ 0.32
CHRNE-201ENST00000293780 CNGB3Q9NQW8 809 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 RIMS3Q9UJD0 308 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 ACOT9Q9Y305 439 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 FIS1Q9Y3D6 152 aa17.07■□□□□ 0.32
CHRNE-201ENST00000293780 HHLA1C9JL84 531 aa17.06■□□□□ 0.32
CHRNE-201ENST00000293780 ARNTP27540 789 aa17.06■□□□□ 0.32
CHRNE-201ENST00000293780 LRPAP1P30533 357 aa17.06■□□□□ 0.32
CHRNE-201ENST00000293780 ADGRE1Q14246 886 aa17.06■□□□□ 0.32
CHRNE-201ENST00000293780 CNGA3Q16281 694 aa17.06■□□□□ 0.32
CHRNE-201ENST00000293780 INTS6LQ5JSJ4 861 aaKnown RBP17.06■□□□□ 0.32
CHRNE-201ENST00000293780 RAB41Q5JT25 222 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms