RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TKTL1P51854 596 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 MPP1Q00013 466 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 SREBF2Q12772 1141 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 CEACAM7Q14002 265 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 NAPEPLDQ6IQ20 393 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 EPGNQ6UW88 154 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 ILDR2Q71H61 639 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 DHFR2Q86XF0 187 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 VPS50Q96JG6 964 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 FCRL3Q96P31 734 aaPredicted RBP13.58□□□□□ -0.24
SCAF4-201ENST00000286835 BCO2Q9BYV7 579 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 MRPL40Q9NQ50 206 aaKnown RBP13.58□□□□□ -0.24
SCAF4-201ENST00000286835 FAM95CA0A1B0GW59 222 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 EEF1DP29692 281 aaKnown RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 SLC7A2P52569 658 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 YWHAHQ04917 246 aaPredicted RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 KIAA1841Q6NSI8 718 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 RNF111Q6ZNA4 994 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 FSTL5Q8N475 847 aaPredicted RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 PPHLN1Q8NEY8 458 aaKnown RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 DRC3Q9H069 523 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 RAB26Q9ULW5 256 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 TRIM38O00635 465 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 CDH13P55290 713 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 MBTD1Q05BQ5 628 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 LPIN1Q14693 890 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 UGP2Q16851 508 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 INSCQ1MX18 579 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 UGT2A3Q6UWM9 527 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 OTOP3Q7RTS5 596 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 KBTBD6Q86V97 674 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 CXorf38Q8TB03 319 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 CROTQ9UKG9 612 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 DSEQ9UL01 958 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 INPP4BO15327 924 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 ATP6V1G1O75348 118 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 ATG7O95352 703 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 CD1EP15812 388 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 PAMP19021 973 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 BEX3Q00994 111 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 NSUN2Q08J23 767 aaKnown RBP eCLIP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 CCDC142Q17RM4 750 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 GPR107Q5VW38 600 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 PGAM4Q8N0Y7 254 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 SPATA22Q8NHS9 363 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 TMIGD2Q96BF3 282 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 GPR20Q99678 358 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 WDCPQ9H6R7 721 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 GNGT2O14610 69 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 GFAPP14136 432 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 PTPN1P18031 435 aaKnown RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 RPL10P27635 214 aaKnown RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 ACADSBP45954 432 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 CCR3P51677 355 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 FBXO47Q5MNV8 452 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 CTU1Q7Z7A3 348 aaKnown RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 IFT43Q96FT9 208 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 ABHD16BQ9H3Z7 469 aa13.57□□□□□ -0.24
SCAF4-201ENST00000286835 PAIP2BQ9ULR5 123 aaKnown RBP13.57□□□□□ -0.24
SCAF4-201ENST00000286835 SBF2Q86WG5 1849 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 HACD1B0YJ81 288 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 RNASEH2AO75792 299 aaKnown RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 HPCAP84074 193 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 ZNF534Q76KX8 674 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 SPNS2Q8IVW8 549 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 GABPB2Q8TAK5 448 aaPredicted RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 DLG3Q92796 817 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 PDZD7Q9H5P4 517 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 EML4Q9HC35 981 aaKnown RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 PFDN4Q9NQP4 134 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 LMCD1Q9NZU5 365 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 PDLIM1O00151 329 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 IL1BP01584 269 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 TFAP2AP05549 437 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 ZNF23P17027 643 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 CDKL1Q00532 357 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 PAN2Q504Q3 1202 aaKnown RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 FAM91A1Q658Y4 838 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 CLEC6AQ6EIG7 209 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 ADGRG6Q86SQ4 1221 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 METTL23Q86XA0 190 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 ATPAF2Q8N5M1 289 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 PNPLA1Q8N8W4 532 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 TUBGCP3Q96CW5 907 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 TSPYL2Q9H2G4 693 aaPredicted RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 NUDT5Q9UKK9 219 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 UBA6A0AVT1 1052 aaPredicted RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 TMEM114B3SHH9 223 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 BTBD19C9JJ37 291 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 H2AFYO75367 372 aaKnown RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 CLIC3O95833 236 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.248e-7■■■□□ 14.9
SCAF4-201ENST00000286835 PSMD7P51665 324 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 CDH17Q12864 832 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 INPP5AQ14642 412 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 DPYSL2Q16555 572 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 FBXO48Q5FWF7 155 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 METTL21CQ5VZV1 264 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms