RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 NCKAP1Q9Y2A7 1128 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 CHADO15335 359 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 EPN2O95208 641 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 TAS2R40P59535 323 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 AUHQ13825 339 aaKnown RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 TOMM20Q15388 145 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 CYP2A13Q16696 494 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 GSTA3Q16772 222 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PTPRNQ16849 979 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 STXBP5Q5T5C0 1151 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 CYP4X1Q8N118 509 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 OR6K2Q8NGY2 324 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PIWIL2Q8TC59 973 aaKnown RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 MKL1Q969V6 931 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 GRIP2Q9C0E4 1043 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 DNMT3LQ9UJW3 386 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 FBXL21Q9UKT6 434 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 UBIAD1Q9Y5Z9 338 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 MAFO75444 373 aaPredicted RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 SPATA31D3P0C874 917 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 CTSEP14091 401 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 GRIA3P42263 894 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 HIRAP54198 1017 aaPredicted RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 SPATA31D4Q6ZUB0 917 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 EXOC3L1Q86VI1 746 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 ZCCHC7Q8N3Z6 543 aaKnown RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 GPR156Q8NFN8 814 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 BAP1Q92560 729 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 ST3GAL5Q9UNP4 418 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 SLC12A4Q9UP95 1085 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 CATP04040 527 aaKnown RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 CAPN1P07384 714 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 HPCAL1P37235 193 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 GRIA4P48058 902 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PRKAA2P54646 552 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 MRPS6P82932 125 aaKnown RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 ALLCQ8N6M5 410 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 CDYL2Q8N8U2 506 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PHACTR1Q9C0D0 580 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 SPATA2Q9UM82 520 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 DIP2CQ9Y2E4 1556 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PAPSS1O43252 624 aaPredicted RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 ANXA5P08758 320 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 ERCC2P18074 760 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 LBPP18428 481 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 EPORP19235 508 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 PPP1R26Q5T8A7 1209 aaPredicted RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 ZNF57Q68EA5 555 aaPredicted RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 ACTRT2Q8TDY3 377 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PAPOLBQ9NRJ5 636 aaKnown RBP11.59□□□□□ -0.55
USP53-201ENST00000274030 ARHGAP28Q9P2N2 729 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 ENTPD4Q9Y227 616 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PCDHA11Q9Y5I1 949 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 HNRNPLP14866 589 aaKnown RBP eCLIP11.59□□□□□ -0.555e-7■■■■■ 30
USP53-201ENST00000274030 BRCC3P46736 316 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 STX4Q12846 297 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 RAET1GQ6H3X3 334 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 GCNT7Q6ZNI0 430 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 RNF44Q7L0R7 432 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PTF1AQ7RTS3 328 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 ZNF276Q8N554 614 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 LRRC39Q96DD0 335 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 APOL4Q9BPW4 351 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 GOLGA2P5Q9HBQ8 144 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 PCDH12Q9NPG4 1184 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 DAPK2Q9UIK4 370 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 COG5Q9UP83 839 aa11.59□□□□□ -0.55
USP53-201ENST00000274030 FGF10O15520 208 aaPredicted RBP11.58□□□□□ -0.56
USP53-201ENST00000274030 ATP4AP20648 1035 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 ABRQ12979 859 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 KCTD21Q4G0X4 260 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 PABPC1LQ4VXU2 614 aaKnown RBP11.58□□□□□ -0.56
USP53-201ENST00000274030 ZC3H7AQ8IWR0 971 aaKnown RBP11.58□□□□□ -0.56
USP53-201ENST00000274030 ANKRD52Q8NB46 1076 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 REPS1Q96D71 796 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 B3GNT5Q9BYG0 378 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 MYRFQ9Y2G1 1151 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 IL1BP01584 269 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 ALOX12P18054 663 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 FSTL1Q12841 308 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 UBAP2LQ14157 1087 aaKnown RBP11.58□□□□□ -0.56
USP53-201ENST00000274030 PDZK1Q5T2W1 519 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 KRT77Q7Z794 578 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 KLHL5Q96PQ7 755 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 C1orf50Q9BV19 199 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 ZYG11BQ9C0D3 744 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 STARD13Q9Y3M8 1113 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 LOC100506127A0A0U1RQW1 187 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 SPATA31C1P0DKV0 1188 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 MYL12AP19105 171 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 BST1Q10588 318 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 COX10Q12887 443 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 PPIL2Q13356 520 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 NOMO2Q5JPE7 1267 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 ZNF605Q86T29 641 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 STK32AQ8WU08 396 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 CKAP2Q8WWK9 683 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 HSFY1Q96LI6 401 aa11.58□□□□□ -0.56
USP53-201ENST00000274030 MECRQ9BV79 373 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms