RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 PXYLP1Q8TE99 480 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 GAD1Q99259 594 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SNRNP25Q9BV90 132 aaKnown RBP16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 DNAJC28Q9NX36 388 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 MIOSQ9NXC5 875 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SLC17A6Q9P2U8 582 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 TET1Q8NFU7 2136 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 C5orf42Q9H799 3197 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ZNF195O14628 629 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 KCNN4O15554 427 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ACAT1P24752 427 aaKnown RBP16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 CDK9P50750 372 aaKnown RBP16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 USP41Q3LFD5 358 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ALKAL1Q6UXT8 129 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 TRIML2Q8N7C3 387 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SLC2A14Q8TDB8 520 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 DEPDC1BQ8WUY9 529 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 KBTBD7Q8WVZ9 684 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ZNF512Q96ME7 567 aaPredicted RBP16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 RNF157Q96PX1 679 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 HEPHQ9BQS7 1158 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 CFHR5Q9BXR6 569 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 CHD7Q9P2D1 2997 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 STK39Q9UEW8 545 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 THSD7BQ9C0I4 1608 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 EYSQ5T1H1 3165 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 KPNA7A9QM74 516 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 XPO1O14980 1071 aaKnown RBP16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 STAU1O95793 577 aaKnown RBP16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ZBED1O96006 694 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 NELFEP18615 380 aaKnown RBP16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 NUDT2P50583 147 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 FLOT2Q14254 428 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PCLAFQ15004 111 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 TICAM1Q8IUC6 712 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 UNC5BQ8IZJ1 945 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 RNF148Q8N7C7 305 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PLD5Q8N7P1 536 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PCDH19Q8TAB3 1148 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 GRIN3AQ8TCU5 1115 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 APBB2Q92870 758 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 TSPAN18Q96SJ8 248 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PKP2Q99959 881 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 NEURL2Q9BR09 285 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.187e-17■■■■■ 27.9
MAP1LC3B-201ENST00000268607 TRPV2Q9Y5S1 764 aa16.2■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SZT2Q5T011 3432 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SYNJ2BP-COX16A0A087WUM0 186 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 F5H423 210 aaPredicted RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PQBP1O60828 265 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 XRCC1P18887 633 aaPredicted RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SERPINB5P36952 375 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 GMPRP36959 345 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ACADVLP49748 655 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 KLF10Q13118 480 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 MBTPS1Q14703 1052 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 NOMO1Q15155 1222 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PQLC3Q8N755 202 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 HASPINQ8TF76 798 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 BIRC8Q96P09 236 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 LENG8Q96PV6 779 aaPredicted RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PRDM16Q9HAZ2 1276 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SLC38A7Q9NVC3 462 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 COX16Q9P0S2 106 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 F8W810 466 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 CLDN5O00501 218 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 KPNA6O60684 536 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ENDOD1O94919 500 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 POMCP01189 267 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 FUCA1P04066 466 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SERPINE1P05121 402 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 OCM2P0CE71 109 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 OCMP0CE72 109 aaPredicted RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 RBL1P28749 1068 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 THOP1P52888 689 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SLC5A3P53794 718 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 BCAR1P56945 870 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SMAD1Q15797 465 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 DHRS4L2Q6PKH6 230 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ADCY4Q8NFM4 1077 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 TSPAN14Q8NG11 270 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 GSDMBQ8TAX9 411 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 CDRT15Q96T59 188 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 RTKNQ9BST9 563 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 DCUN1D5Q9BTE7 237 aa16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PAIP1Q9H074 479 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 DHX35Q9H5Z1 703 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 UBQLN1Q9UMX0 589 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-201ENST00000268607 FAM159BA6NKW6 160 aa16.18■□□□□ 0.18
MAP1LC3B-201ENST00000268607 OXSR1O95747 527 aaPredicted RBP16.18■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PKNOX1P55347 436 aa16.18■□□□□ 0.18
MAP1LC3B-201ENST00000268607 CD300CQ08708 224 aa16.18■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SPIDRQ14159 915 aa16.18■□□□□ 0.18
MAP1LC3B-201ENST00000268607 SLAIN1Q8ND83 568 aa16.18■□□□□ 0.18
MAP1LC3B-201ENST00000268607 ERLEC1Q96DZ1 483 aa16.18■□□□□ 0.18
MAP1LC3B-201ENST00000268607 TMPRSS4Q9NRS4 437 aa16.18■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PAK5Q9P286 719 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms