RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 SMAD5Q99717 465 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 RAD21L1Q9H4I0 556 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 RIBC2Q9H4K1 309 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 UGT1A7Q9HAW7 530 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 UGT1A10Q9HAW8 530 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 UGT1A8Q9HAW9 530 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 VTA1Q9NP79 307 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ANAPC2Q9UJX6 822 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ATRNL1Q5VV63 1379 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 KATNA1O75449 491 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 POMCP01189 267 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 GSNP06396 782 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 CCR1P32246 355 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 CCDC142Q17RM4 750 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 WSCD1Q658N2 575 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 SCIMPQ6UWF3 145 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ABRAXAS1Q6UWZ7 409 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ANKS1BQ7Z6G8 1248 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 HERC6Q8IVU3 1022 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 PSMA8Q8TAA3 256 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 LMO3Q8TAP4 145 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 PDGFCQ9NRA1 345 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 DNAAF2Q9NVR5 837 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 EURLQ9NYK6 297 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 LNPEPQ9UIQ6 1025 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 CILPO75339 1184 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ERCC2P18074 760 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 CCT8P50990 548 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 SLC5A3P53794 718 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 EFEMP1Q12805 493 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 CTBP1Q13363 440 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 NADK2Q4G0N4 442 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ARMC4Q5T2S8 1044 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 EFL1Q7Z2Z2 1120 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 SNX31Q8N9S9 440 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 OR7A2PQ8NGA2 310 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 SLCO2A1Q92959 643 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ALG9Q9H6U8 611 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 PCDHGC3Q9UN70 934 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 COL14A1Q05707 1796 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 GPR25O00155 361 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 STX7O15400 261 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 C2P06681 752 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 SLC2A3P11169 496 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 TTKP33981 857 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 CDH13P55290 713 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 TREML2Q5T2D2 321 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ITFG1Q8TB96 612 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ACMSDQ8TDX5 336 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 HPS1Q92902 700 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 FBXL18Q96ME1 805 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 MRPL45Q9BRJ2 306 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 RTKNQ9BST9 563 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 NIFKQ9BYG3 293 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 ABHD16BQ9H3Z7 469 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 TIMMDC1Q9NPL8 285 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 COMMD8Q9NX08 183 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 OR12D3Q9UGF7 316 aa11.69□□□□□ -0.54
VPS33A-201ENST00000267199 TRMT6Q9UJA5 497 aaKnown RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 MAFBQ9Y5Q3 323 aaPredicted RBP11.69□□□□□ -0.54
VPS33A-201ENST00000267199 NUP98P52948 1817 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 LOC100506127A0A0U1RQW1 187 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 DHRS12A0PJE2 317 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 C9JVG2 144 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 SYNCRIPO60506 623 aaKnown RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 FAM20BO75063 409 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 PTPN1P18031 435 aaKnown RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 NAB1Q13506 487 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 DRICH1Q6PGQ1 229 aaPredicted RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 ILDR2Q71H61 639 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 SFRP1Q8N474 314 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 ATP6V0D2Q8N8Y2 350 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 P2RY11Q96G91 374 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 SENP8Q96LD8 212 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 TCF12Q99081 682 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 GAD1Q99259 594 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 MUC3BQ9H195 1237 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 LIN28AQ9H9Z2 209 aaKnown RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 CCDC154A6NI56 674 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 BUD23O43709 281 aaKnown RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 LZTS3O60299 673 aaPredicted RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 OR6B1O95007 311 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 NFKB1P19838 968 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 CRHR1P34998 444 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 MARC1Q5VT66 337 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 SLC39A4Q6P5W5 647 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 LCLAT1Q6UWP7 414 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 BORCS5Q969J3 196 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 FAM120BQ96EK7 910 aaKnown RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 GPR20Q99678 358 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 STN1Q9H668 368 aaKnown RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 DGKBQ9Y6T7 804 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 TCRBV7S3A2A0A539 114 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 NPR3P17342 541 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 AKT1P31749 480 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 TUBP50607 506 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 DGUOKQ16854 277 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 SLC22A9Q8IVM8 553 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms