RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TASP1Q9H6P5 420 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 SLC28A3Q9HAS3 691 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 CPSF2Q9P2I0 782 aaKnown RBP9.46□□□□□ -0.9
SSR3-201ENST00000265044 STK39Q9UEW8 545 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 TSR3Q9UJK0 312 aaKnown RBP9.46□□□□□ -0.9
SSR3-201ENST00000265044 CHKBQ9Y259 395 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 FIS1Q9Y3D6 152 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 MGAMO43451 1857 aa9.46□□□□□ -0.9
SSR3-201ENST00000265044 HEATR9A2RTY3 570 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 A8MX80 341 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 UGT1A9O60656 530 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 GSTA2P09210 222 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 CTSAP10619 480 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 CTBP1Q13363 440 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 ANKRD20A4Q4UJ75 823 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 HS6ST3Q8IZP7 471 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 NAT16Q8N8M0 369 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 ST13P5Q8NFI4 369 aaPredicted RBP9.45□□□□□ -0.9
SSR3-201ENST00000265044 AGR3Q8TD06 166 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 CALML6Q8TD86 181 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 SLC44A1Q8WWI5 657 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 MTBPQ96DY7 904 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 PKMYT1Q99640 499 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 EPB41L4BQ9H329 900 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 UGT1A7Q9HAW7 530 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 UGT1A10Q9HAW8 530 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 UGT1A8Q9HAW9 530 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 MARCOQ9UEW3 520 aaPredicted RBP9.45□□□□□ -0.9
SSR3-201ENST00000265044 ASB3Q9Y575 518 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 C2orf81A6NN90 581 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 KIAA0355O15063 1070 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 TSHRP16473 764 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 GLRBP48167 497 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 MAPKAPK2P49137 400 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 RING1Q06587 406 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 CDK18Q07002 472 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 CCNYL1Q8N7R7 359 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 SIGLEC10Q96LC7 697 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 SRPK1Q96SB4 655 aaKnown RBP9.45□□□□□ -0.9
SSR3-201ENST00000265044 BBS2Q9BXC9 721 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 TRIM55Q9BYV6 548 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 SLC25A51Q9H1U9 297 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 MAGEH1Q9H213 219 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 SLC17A6Q9P2U8 582 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 ANK1P16157 1881 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 I6L893 689 aaPredicted RBP9.45□□□□□ -0.9
SSR3-201ENST00000265044 NDUFS3O75489 264 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 STC2O76061 302 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 F7P08709 466 aaPredicted RBP9.45□□□□□ -0.9
SSR3-201ENST00000265044 PTPN2P17706 415 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 BMPR1AP36894 532 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 LIG3P49916 1009 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 OVGP1Q12889 678 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 ZRANB3Q5FWF4 1079 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 KLC3Q6P597 504 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 YAF2Q8IY57 180 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 SCG3Q8WXD2 468 aaKnown RBP9.45□□□□□ -0.9
SSR3-201ENST00000265044 SMG7Q92540 1137 aaKnown RBP9.45□□□□□ -0.9
SSR3-201ENST00000265044 SGF29Q96ES7 293 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 SEC16BQ96JE7 1060 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 TTC1Q99614 292 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 HERC2P3Q9BVR0 1158 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 MANSC1Q9H8J5 431 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 AGO1Q9UL18 857 aaKnown RBP9.45□□□□□ -0.9
SSR3-201ENST00000265044 PCDHGC4Q9Y5F7 938 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 SLC30A1Q9Y6M5 507 aa9.45□□□□□ -0.9
SSR3-201ENST00000265044 TDRD15B5MCY1 1934 aaKnown RBP9.44□□□□□ -0.9
SSR3-201ENST00000265044 GRXCR1A8MXD5 290 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 CXorf49A8MYA2 514 aaPredicted RBP9.44□□□□□ -0.9
SSR3-201ENST00000265044 CCL22O00626 93 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 TIMM44O43615 452 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 MAFKO60675 156 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 ST8SIA6P61647 398 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 IL10RBQ08334 325 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 GPM6BQ13491 265 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 PDPK2PQ6A1A2 396 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 NEPROQ6NW34 567 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 CRLF3Q8IUI8 442 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 DCLK2Q8N568 766 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 ADGRE3Q9BY15 652 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 RNF38Q9H0F5 515 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 MAN1C1Q9NR34 630 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 TMEM248Q9NWD8 314 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 NSMCE4AQ9NXX6 385 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.44□□□□□ -0.95e-8■■■■□ 25.6
SSR3-201ENST00000265044 NEDD8-MDP1E9PL57 170 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 FOXR1Q6PIV2 292 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 SPATA21Q7Z572 469 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 RTP4Q96DX8 246 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 RPL10LQ96L21 214 aaKnown RBP9.44□□□□□ -0.9
SSR3-201ENST00000265044 FCRL5Q96RD9 977 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 C17orf80Q9BSJ5 609 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 TSSK1BQ9BXA7 367 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 NPHS2Q9NP85 383 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 EIF2B3Q9NR50 452 aaKnown RBP9.44□□□□□ -0.9
SSR3-201ENST00000265044 VPS45Q9NRW7 570 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 MSRAQ9UJ68 235 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 PCDHB9Q9Y5E1 797 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms