RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PIH1D1Q9NWS0 290 aaKnown RBP12.56□□□□□ -0.4
CHMP2B-201ENST00000263780 CACNA2D2Q9NY47 1150 aa12.56□□□□□ -0.4
CHMP2B-201ENST00000263780 NCKIPSDQ9NZQ3 722 aa12.56□□□□□ -0.4
CHMP2B-201ENST00000263780 CD300AQ9UGN4 299 aa12.56□□□□□ -0.4
CHMP2B-201ENST00000263780 SLC39A10Q9ULF5 831 aa12.56□□□□□ -0.4
CHMP2B-201ENST00000263780 RUVBL2Q9Y230 463 aaKnown RBP12.56□□□□□ -0.4
CHMP2B-201ENST00000263780 TNFSF13BQ9Y275 285 aa12.56□□□□□ -0.4
CHMP2B-201ENST00000263780 SRP72O76094 671 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 STAU1O95793 577 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 SNRPB2P08579 225 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 NFICP08651 508 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 IL10P22301 178 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 GMPRP36959 345 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 INPP5AQ14642 412 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 PSMD5Q16401 504 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 KYAT1Q16773 422 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 FASTKD5Q7L8L6 764 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 PID1Q7Z2X4 250 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 KCNMB4Q86W47 210 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 CENPSQ8N2Z9 138 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 DNAAF3Q8N9W5 541 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 KDM1BQ8NB78 822 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 PNPT1Q8TCS8 783 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 TRUB1Q8WWH5 349 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 GPR22Q99680 433 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 GPATCH1Q9BRR8 931 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 FZD8Q9H461 694 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 ACAD9Q9H845 621 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 INIPQ9NRY2 104 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 SEPT10Q9P0V9 454 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 ZNF646O15015 1829 aaPredicted RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 ZCWPW2A0A1B0GU75 182 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 CCDC162PA2VCL2 907 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 TMEM247A6NEH6 219 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 YDJCA8MPS7 323 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 LACTBL1A8MY62 500 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 H3BMQ9 156 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 SDHDO14521 159 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 CDH3P22223 829 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 CCR3P51677 355 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 RBP5P82980 135 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 MPP1Q00013 466 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 MERTKQ12866 999 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 DLG2Q15700 870 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 REP15Q6BDI9 236 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 HMBOX1Q6NT76 420 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 ABRAXAS1Q6UWZ7 409 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 GK5Q6ZS86 529 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 SCUBE3Q8IX30 993 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 LSMEM2Q8N112 164 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 PELI3Q8N2H9 469 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 CCNYQ8ND76 341 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 OR52K1Q8NGK4 314 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 MARK4Q96L34 752 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 COG8Q96MW5 612 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 AGAP2Q99490 1192 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 ADI1Q9BV57 179 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 TDRD1Q9BXT4 1180 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 MRM3Q9HC36 420 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 TMEM181Q9P2C4 612 aa12.55□□□□□ -0.4
CHMP2B-201ENST00000263780 TRIM64BA6NI03 449 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 AQP12BA6NM10 295 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 TK2O00142 265 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 UBDO15205 165 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 GPC4O75487 556 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ATE1O95260 518 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 AP2A1O95782 977 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ALDH2P05091 517 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 UGT1A6P19224 532 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 TFE3P19532 575 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 UGT1A1P22309 533 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 UGT1A4P22310 534 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 DNAJB2P25686 324 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 UGT1A3P35503 534 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 UGT1A5P35504 534 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 HALP42357 657 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 GRSF1Q12849 480 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 SEPT6Q14141 434 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 FASTKQ14296 549 aaKnown RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 USP10Q14694 798 aaKnown RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 DGKDQ16760 1214 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 UGP2Q16851 508 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 RGS21Q2M5E4 152 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 JADE1Q6IE81 842 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 SLC26A9Q7LBE3 791 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 STRADAQ7RTN6 431 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 AQP12AQ8IXF9 295 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ZNF567Q8N184 647 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 MTMR14Q8NCE2 650 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ZNF526Q8TF50 670 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 C11orf84Q9BUA3 381 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 C1QTNF1Q9BXJ1 281 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 CDT1Q9H211 546 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 RHOJQ9H4E5 214 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 EML4Q9HC35 981 aaKnown RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms