RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 FBF1Q8TES7 1133 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 OTUB2Q96DC9 234 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 STAMBPL1Q96FJ0 436 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 CFAP36Q96G28 342 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 MRGPRX2Q96LB1 330 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 PSKH2Q96QS6 385 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 MGME1Q9BQP7 344 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 CENPHQ9H3R5 247 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 ACSS3Q9H6R3 686 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 SYBUQ9NX95 663 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 VPS28Q9UK41 221 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 TLDC2A0PJX2 215 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 SMIM23A6NLE4 172 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 HMGB1P1B2RPK0 211 aaPredicted RBP23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 SNAP91O60641 907 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 CD160O95971 181 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 SLCO1A2P46721 670 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 CDH17Q12864 832 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 IHHQ14623 411 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 STEAP4Q687X5 459 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 UNC5AQ6ZN44 842 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 TMEM25Q86YD3 366 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 CCDC117Q8IWD4 279 aaPredicted RBP23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 LMLNQ96KR4 655 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 APOL2Q9BQE5 337 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 FICDQ9BVA6 458 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 LINC00597Q9H2U6 94 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 ZNF576Q9H609 170 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 HAUS2Q9NVX0 235 aa23.24■■□□□ 1.31
SMARCB1-201ENST00000263121 EXOC1LA0A1B0GW35 172 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 TCRBV9S1A1TA0A576 114 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 PMPCBO75439 489 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 GCAP28676 217 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 CD86P42081 329 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 NPY2RP49146 381 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 CRADDP78560 199 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 SKOR1P84550 965 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 LMAN2Q12907 356 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 CYTH1Q15438 398 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 KCTD16Q68DU8 428 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 DENND5AQ6IQ26 1287 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 CHRDL2Q6WN34 429 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 CCNJLQ8IV13 435 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 DNAAF3Q8N9W5 541 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 IRF7Q92985 503 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 RSPRY1Q96DX4 576 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 LRRC3BQ96PB8 259 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 XPO6Q96QU8 1125 aaKnown RBP23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 NAT9Q9BTE0 207 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 CINPQ9BW66 212 aaPredicted RBP23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 APOL5Q9BWW9 433 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 SPHK2Q9NRA0 654 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 EURLQ9NYK6 297 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 BFARQ9NZS9 450 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 KIAA1522Q9P206 1035 aaPredicted RBP23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 FETUBQ9UGM5 382 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 VPS51Q9UID3 782 aa23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 TNRC18O15417 2968 aaPredicted RBP23.23■■□□□ 1.31
SMARCB1-201ENST00000263121 SLC9A3R1O14745 358 aaPredicted RBP23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 AGTP01019 485 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 C1QAP02745 245 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 WNT3AP56704 352 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 TNFAIP8L3Q5GJ75 292 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 RANBP10Q6VN20 620 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 TDRPQ86YL5 185 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 APCDD1Q8J025 514 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 FGF13Q92913 245 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 TLCD1Q96CP7 247 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 ASB16Q96NS5 453 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 SEMA3CQ99985 751 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 TRIM56Q9BRZ2 755 aaKnown RBP23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 PPCSQ9HAB8 311 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 CDH22Q9UJ99 828 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 WNT6Q9Y6F9 365 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 RGS16O15492 202 aaPredicted RBP23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 PGAM1P18669 254 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 STX2P32856 288 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 PLK1P53350 603 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 ADAM15Q13444 863 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 KLHL38Q2WGJ6 581 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 INO80DQ53TQ3 878 aaPredicted RBP23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 FAM78AQ5JUQ0 283 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 ADGRG2Q8IZP9 1017 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 SH2D3CQ8N5H7 860 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 GSDMBQ8TAX9 411 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 FSD1LQ9BXM9 530 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 MARK1Q9P0L2 795 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 VPS18Q9P253 973 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 LGALS13Q9UHV8 139 aa23.22■■□□□ 1.31
SMARCB1-201ENST00000263121 TTC24A2A3L6 582 aaPredicted RBP23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 POLR3GO15318 223 aaPredicted RBP23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 CDH16O75309 829 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 HOXB8P17481 243 aaPredicted RBP23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 CR2P20023 1033 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 CD70P32970 193 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 SLC12A1Q13621 1099 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 SLC14A2Q15849 920 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 CERCAMQ5T4B2 595 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 CASC4Q6P4E1 433 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 LINGO4Q6UY18 593 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms