RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SLCO3A1Q9UIG8 710 aa11.81□□□□□ -0.52
PFDN1-201ENST00000261813 PLA2G4CQ9UP65 541 aa11.81□□□□□ -0.52
PFDN1-201ENST00000261813 ATG2BQ96BY7 2078 aa11.81□□□□□ -0.52
PFDN1-201ENST00000261813 RASA4BC9J798 803 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 NPC1O15118 1278 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 RASA4O43374 803 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 ZNF189O75820 626 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-201ENST00000261813 ZMPSTE24O75844 475 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 MT-CO1P00395 513 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 F12P00748 615 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-201ENST00000261813 SRPRAP08240 638 aaKnown RBP11.8□□□□□ -0.52
PFDN1-201ENST00000261813 ID4P47928 161 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 ARF5P84085 180 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 CSTF1Q05048 431 aaKnown RBP11.8□□□□□ -0.52
PFDN1-201ENST00000261813 DMWDQ09019 674 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 POLD3Q15054 466 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-201ENST00000261813 TAZQ16635 292 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 AFMIDQ63HM1 303 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 IL31Q6EBC2 164 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 SDE2Q6IQ49 451 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 SERPINA13PQ6UXR4 307 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 LINGO4Q6UY18 593 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 SPOCD1Q6ZMY3 1216 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 SLC13A5Q86YT5 568 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-201ENST00000261813 KDM1BQ8NB78 822 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 PCDH19Q8TAB3 1148 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-201ENST00000261813 HMCESQ96FZ2 354 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 HHIPQ96QV1 700 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 SLC39A8Q9C0K1 460 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 MTG2Q9H4K7 406 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 FEZ2Q9UHY8 353 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-201ENST00000261813 SLC25A13Q9UJS0 675 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 FBXO4Q9UKT5 387 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 SLC8A2Q9UPR5 921 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 ACTL7AQ9Y615 435 aa11.8□□□□□ -0.52
PFDN1-201ENST00000261813 TTC34A8MYJ7 566 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 K7ERQ8 282 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 CBX4O00257 560 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 KRIT1O00522 736 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 ZNF185O15231 689 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 KDELR3O43731 214 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 CD160O95971 181 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 EPHX1P07099 455 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 SRCP12931 536 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 ETFBP38117 255 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 CDKN2BP42772 138 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 DGKEP52429 567 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 NDST2P52849 883 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 YBEYP58557 167 aaPredicted RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 ST8SIA6P61647 398 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 ZNF211Q13398 564 aaPredicted RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 E2F5Q15329 346 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 PARP15Q460N3 678 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 ANKRD20A8PQ5CZ79 823 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 DCAF12L1Q5VU92 463 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 NCBP2-AS2Q69YL0 99 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 TMCO3Q6UWJ1 677 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 MFSD7Q6UXD7 560 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 BZW1Q7L1Q6 419 aaKnown RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 SH2D3CQ8N5H7 860 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 PQLC3Q8N755 202 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 FRS2Q8WU20 508 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 HS3ST2Q9Y278 367 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 CHD5Q8TDI0 1954 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 PTPRZ1P23471 2315 aaPredicted RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 hCG_1818297A0A087WSY0 165 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 TCRBV21S2A2A0A5A6 115 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 EFCAB8A8MWE9 144 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 SMAD6O43541 496 aaKnown RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 ATP9BO43861 1147 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 SP9P0CG40 484 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 VAV1P15498 845 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 PXNP49023 591 aaPredicted RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 PAPOLAP51003 745 aaKnown RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 COPAP53621 1224 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 LMNB2Q03252 620 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 SERINC3Q13530 473 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 HNRNPA1L2Q32P51 320 aaKnown RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 LEKR1Q6ZMV7 388 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 ARHGAP36Q6ZRI8 547 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 ZNF354CQ86Y25 554 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 CAMKK1Q8N5S9 505 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 LZTR1Q8N653 840 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 SPATA4Q8NEY3 305 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 TSTD1Q8NFU3 115 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 NELL1Q92832 810 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 MS4A14Q96JA4 679 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 RNF157Q96PX1 679 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 CARD6Q9BX69 1037 aa11.79□□□□□ -0.52
PFDN1-201ENST00000261813 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
PFDN1-201ENST00000261813 J3KR12 359 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 DFFAO00273 331 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 MFSD11O43934 449 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 SYNCRIPO60506 623 aaKnown RBP11.78□□□□□ -0.52
PFDN1-201ENST00000261813 SIN3BO75182 1162 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 APBB3O95704 486 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 GABRG2P18507 467 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 TGM2P21980 687 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 HOXA6P31267 233 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms