RNA–Protein interactions for RNA: ENST00000261523.9

RORA-201, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-201ENST00000261523 SNX9Q9Y5X1 595 aa7.09□□□□□ -1.27
RORA-201ENST00000261523 TSC2P49815 1807 aa7.09□□□□□ -1.28
RORA-201ENST00000261523 REV3LO60673 3130 aa7.09□□□□□ -1.28
RORA-201ENST00000261523 NUP205Q92621 2012 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 LINC01553A4QN01 128 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 TMEM114B3SHH9 223 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 AP1G1O43747 822 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 LTFP02788 710 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SPATA31D3P0C874 917 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ETS2P15036 469 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 PIK3R1P27986 724 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ADORA2BP29275 332 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SERPINB6P35237 376 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 GARSP41250 739 aaKnown RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 GRM5P41594 1212 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ABCG1P45844 678 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ALDH1A3P47895 512 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SERPINB8P50452 374 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 PITX1P78337 314 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 MGAT3Q09327 533 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 PDAP1Q13442 181 aaKnown RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 TLR1Q15399 786 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 DLG2Q15700 870 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SLC5A9Q2M3M2 681 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 MMEL1Q495T6 779 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 FSCBQ5H9T9 825 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 MARCH8Q5T0T0 291 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SPATA31D4Q6ZUB0 917 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 STRADAQ7RTN6 431 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SDCCAG8Q86SQ7 713 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 FAM131BQ86XD5 332 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 NT5DC4Q86YG4 428 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SDR16C5Q8N3Y7 309 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ANKRD52Q8NB46 1076 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ACVR1CQ8NER5 493 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 OR52K1Q8NGK4 314 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 NAT14Q8WUY8 206 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 C18orf25Q96B23 403 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 PGBD4Q96DM1 585 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 LENG8Q96PV6 779 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 YME1L1Q96TA2 773 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.08□□□□□ -1.285e-7■■■□□ 15.2
RORA-201ENST00000261523 SEPT10Q9P0V9 454 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 IGSF9Q9P2J2 1179 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 RCOR3Q9P2K3 495 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 TUBGCP4Q9UGJ1 667 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 PACSIN3Q9UKS6 424 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 MTCH2Q9Y6C9 303 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 CDY2AQ9Y6F7 541 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 CDY1Q9Y6F8 540 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 RPS6KL1Q9Y6S9 549 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 COMMD3-BMI1R4GMX3 469 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ZCWPW2A0A1B0GU75 182 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 CAPN8A6NHC0 703 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 STK10O94804 968 aaKnown RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 OR6B1O95007 311 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 HSPA4LO95757 839 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 CHRNA1P02708 482 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 POLBP06746 335 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ACAT1P24752 427 aaKnown RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 ARL4AP40617 200 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 CCR10P46092 362 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 CHN2P52757 468 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 LIMK2P53671 638 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SNX16P57768 344 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 BST2Q10589 180 aaKnown RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 FRG1Q14331 258 aaKnown RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 PAFAH1B3Q15102 231 aaKnown RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 ZBTB6Q15916 424 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 FBXO47Q5MNV8 452 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 METTL21CQ5VZV1 264 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 FSTL4Q6MZW2 842 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 TMC7Q7Z402 723 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 STRA8Q7Z7C7 330 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 SATL1Q86VE3 508 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 UNC93AQ86WB7 457 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 DEFB106AQ8N104 65 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 PQLC1Q8N2U9 271 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 MARVELD2Q8N4S9 558 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 FBXO22Q8NEZ5 403 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 OR6B3Q8NGW1 331 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 RNF139Q8WU17 664 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 KBTBD7Q8WVZ9 684 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 DNAJB3Q8WWF6 145 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ZNF669Q96BR6 464 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 MOCOSQ96EN8 888 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ATXN7L3BQ96GX2 97 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ASB2Q96Q27 587 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 GCNAQ96QF7 691 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 KCNK16Q96T55 309 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 AGAP2Q99490 1192 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 MCMBPQ9BTE3 642 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 GATA5Q9BWX5 397 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 EPB41L1Q9H4G0 881 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ZNF385DQ9H6B1 395 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 WDR55Q9H6Y2 383 aaPredicted RBP7.08□□□□□ -1.28
RORA-201ENST00000261523 CAB39LQ9H9S4 337 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 ACSS2Q9NR19 701 aa7.08□□□□□ -1.28
RORA-201ENST00000261523 UBAP1Q9NZ09 502 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms