RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 USP36Q9P275 1121 aaKnown RBP17.08■□□□□ 0.33
SDCBP-201ENST00000260130 CYP8B1Q9UNU6 501 aa17.08■□□□□ 0.33
SDCBP-201ENST00000260130 HYOU1Q9Y4L1 999 aa17.08■□□□□ 0.33
SDCBP-201ENST00000260130 ACTL7AQ9Y615 435 aa17.08■□□□□ 0.33
SDCBP-201ENST00000260130 CKAP5Q14008 2032 aa17.08■□□□□ 0.33
SDCBP-201ENST00000260130 MACROD2A1Z1Q3 448 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 ARHGAP42A6NI28 874 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 MAP3K13O43283 966 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 BUB1O43683 1085 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 SPOPO43791 374 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 DNTTP04053 509 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 TPMTP51580 245 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 MMRN1Q13201 1228 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 LPAL2Q16609 132 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 PLK5Q496M5 336 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 MMAAQ8IVH4 418 aaKnown RBP17.08■□□□□ 0.32
SDCBP-201ENST00000260130 RHOT1Q8IXI2 618 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 NPWQ8N729 165 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 CEP44Q9C0F1 390 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 ETNK2Q9NVF9 386 aa17.08■□□□□ 0.32
SDCBP-201ENST00000260130 MBD1Q9UIS9 605 aaPredicted RBP17.08■□□□□ 0.32
SDCBP-201ENST00000260130 IGHV1OR15-9A0A0B4J2B8 117 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 PRR23AA6NEV1 266 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 MCF2LO15068 1137 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 BNIP3LO60238 219 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 PRLRP16471 622 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 BCKDHBP21953 392 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 PAPOLAP51003 745 aaKnown RBP17.07■□□□□ 0.32
SDCBP-201ENST00000260130 NAP1L1P55209 391 aaKnown RBP17.07■□□□□ 0.32
SDCBP-201ENST00000260130 C22orf39Q6P5X5 142 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 ASCL5Q7RTU5 278 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 ARHGAP12Q8IWW6 846 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 TPCN2Q8NHX9 752 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 COG1Q8WTW3 980 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 CCDC114Q96M63 670 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 ZNF670Q9BS34 389 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 DUSP15Q9H1R2 295 aaPredicted RBP17.07■□□□□ 0.32
SDCBP-201ENST00000260130 SCML1Q9UN30 329 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 FCF1Q9Y324 198 aaKnown RBP17.07■□□□□ 0.32
SDCBP-201ENST00000260130 MFHAS1Q9Y4C4 1052 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 FARP1Q9Y4F1 1045 aaPredicted RBP17.07■□□□□ 0.32
SDCBP-201ENST00000260130 ZFHX2Q9C0A1 2572 aaPredicted RBP17.07■□□□□ 0.32
SDCBP-201ENST00000260130 FRYLO94915 3013 aa17.07■□□□□ 0.32
SDCBP-201ENST00000260130 ZNF821O75541 412 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-201ENST00000260130 KDELR1P24390 212 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 CST6Q15828 149 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 ANKRD20A8PQ5CZ79 823 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 C11orf63Q6NUN7 778 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 SLC36A4Q6YBV0 504 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 DSG4Q86SJ6 1040 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 DAAM2Q86T65 1068 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 PCDH20Q8N6Y1 951 aaKnown RBP17.06■□□□□ 0.32
SDCBP-201ENST00000260130 NETO2Q8NC67 525 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 OR2A12Q8NGT7 310 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 OR8D1Q8WZ84 308 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 RAPGEF5Q92565 580 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 ISG20Q96AZ6 181 aaKnown RBP17.06■□□□□ 0.32
SDCBP-201ENST00000260130 GOLPH3Q9H4A6 298 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 SNX12Q9UMY4 172 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 ALOX15BO15296 676 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 RHOBTB1O94844 696 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 IL1BP01584 269 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 IGLV3-19P01714 112 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 OXTRP30559 389 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 TTC31Q49AM3 519 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-201ENST00000260130 INO80DQ53TQ3 878 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-201ENST00000260130 LAIR1Q6GTX8 287 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 ALS2CR12Q96Q35 445 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 TNKS2Q9H2K2 1166 aa17.06■□□□□ 0.32
SDCBP-201ENST00000260130 DFFAO00273 331 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 CD6P30203 668 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 SLC8A1P32418 973 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 SERPINB6P35237 376 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 RECQLP46063 649 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-201ENST00000260130 DNA2P51530 1060 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 CCNI2Q6ZMN8 369 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-201ENST00000260130 ZNF572Q7Z3I7 529 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-201ENST00000260130 MMGT1Q8N4V1 131 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 PCDH19Q8TAB3 1148 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 CASKIN2Q8WXE0 1202 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 FAF2Q96CS3 445 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 DDX56Q9NY93 547 aaKnown RBP17.05■□□□□ 0.32
SDCBP-201ENST00000260130 WSB2Q9NYS7 404 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-201ENST00000260130 PPM1HQ9ULR3 514 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 WDR87Q6ZQQ6 2873 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 EML5Q05BV3 1969 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 LRRD1A4D1F6 860 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 J3KR12 359 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 GFRA3O60609 400 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 PRAMEF11O60813 436 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 SFSWAPQ12872 951 aaKnown RBP17.05■□□□□ 0.32
SDCBP-201ENST00000260130 CARD16Q5EG05 197 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 PMS2CLQ68D20 193 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 LPCAT2Q7L5N7 544 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 TP53INP2Q8IXH6 220 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 PLPP6Q8IY26 295 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 TOE1Q96GM8 510 aaKnown RBP17.05■□□□□ 0.32
SDCBP-201ENST00000260130 PABPC3Q9H361 631 aaKnown RBP17.05■□□□□ 0.32
SDCBP-201ENST00000260130 NCKAP1Q9Y2A7 1128 aa17.05■□□□□ 0.32
SDCBP-201ENST00000260130 CHD5Q8TDI0 1954 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms