RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ELK3P41970 407 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 MAPKAPK2P49137 400 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 SGSHP51688 502 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 CLCN5P51795 746 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 CDK16Q00536 496 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 CCDC38Q502W7 563 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 AGBL2Q5U5Z8 902 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 ASTLQ6HA08 431 aaPredicted RBP17.77■□□□□ 0.44
SRSF1-201ENST00000258962 CAPN12Q6ZSI9 719 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 MAML1Q92585 1016 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 ROPN1BQ9BZX4 212 aaPredicted RBP17.77■□□□□ 0.44
SRSF1-201ENST00000258962 CENPHQ9H3R5 247 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 ROPN1Q9HAT0 212 aaPredicted RBP17.77■□□□□ 0.44
SRSF1-201ENST00000258962 GOLGA6AQ9NYA3 693 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 DONSONQ9NYP3 566 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 IPO11Q9UI26 975 aaKnown RBP17.77■□□□□ 0.44
SRSF1-201ENST00000258962 CPQQ9Y646 472 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 A0A087WUV0 522 aaPredicted RBP17.77■□□□□ 0.43
SRSF1-201ENST00000258962 SMIM23A6NLE4 172 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 A6NNZ2 444 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 HMGB1P1B2RPK0 211 aaPredicted RBP17.77■□□□□ 0.43
SRSF1-201ENST00000258962 MAN2B1O00754 1011 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 TRDMT1O14717 391 aaKnown RBP17.77■□□□□ 0.43
SRSF1-201ENST00000258962 TCEA3O75764 348 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 GLULP15104 373 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 SLCO1A2P46721 670 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 STARD6P59095 220 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 RPS24P62847 133 aaKnown RBP17.77■□□□□ 0.43
SRSF1-201ENST00000258962 PDGFRLQ15198 375 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 LONRF1Q17RB8 773 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 TUBB8Q3ZCM7 444 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 ADGRF1Q5T601 910 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 ITPRIPL1Q6GPH6 555 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 TIGD7Q6NT04 549 aaPredicted RBP17.77■□□□□ 0.43
SRSF1-201ENST00000258962 ZNF852Q6ZMS4 543 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 TPRG1Q6ZUI0 275 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 KLHDC8BQ8IXV7 354 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 ATP11CQ8NB49 1132 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 FATE1Q969F0 183 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 MLPHQ9BV36 600 aaPredicted RBP17.77■□□□□ 0.43
SRSF1-201ENST00000258962 VPS37BQ9H9H4 285 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 XAB2Q9HCS7 855 aaKnown RBP17.77■□□□□ 0.43
SRSF1-201ENST00000258962 STOML2Q9UJZ1 356 aa17.77■□□□□ 0.43
SRSF1-201ENST00000258962 MRPS17Q9Y2R5 130 aaKnown RBP17.77■□□□□ 0.43
SRSF1-201ENST00000258962 TLDC2A0PJX2 215 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 ARHGAP42A6NI28 874 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 J3KR12 359 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 LEFTY2O00292 366 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 RASGRF2O14827 1237 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 CACNG3O60359 315 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 LATS1O95835 1130 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 TCF3P15923 654 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 TSHRP16473 764 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 AVPR2P30518 371 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 SSTR1P30872 391 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 OR1E1P30953 314 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 IFNAR2P48551 515 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 LMAN1P49257 510 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 USP4Q13107 963 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 STAT4Q14765 748 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 ZNF77Q15935 545 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 PARP15Q460N3 678 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 IER5LQ5T953 404 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 KCTD11Q693B1 232 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 Q6ZNB5 142 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 PGM2Q96G03 612 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 SIGLEC10Q96LC7 697 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 FAM83CQ9BQN1 747 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 C8orf33Q9H7E9 229 aaPredicted RBP17.76■□□□□ 0.43
SRSF1-201ENST00000258962 DUS2Q9NX74 493 aaKnown RBP17.76■□□□□ 0.43
SRSF1-201ENST00000258962 PIAS3Q9Y6X2 628 aa17.76■□□□□ 0.43
SRSF1-201ENST00000258962 KANSL1LA0AUZ9 987 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 ARNTLO00327 626 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 RAMP2O60895 175 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 SUN1O94901 812 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 AP2A1O95782 977 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 MLNP12872 115 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 ACVRL1P37023 503 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 CDH4P55283 916 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 YBEYP58557 167 aaPredicted RBP17.75■□□□□ 0.43
SRSF1-201ENST00000258962 OLIG2Q13516 323 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 SPARCL1Q14515 664 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 POLD3Q15054 466 aaPredicted RBP17.75■□□□□ 0.43
SRSF1-201ENST00000258962 ITPRIPL2Q3MIP1 535 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 GLIPR1L2Q4G1C9 344 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 RABGAP1LQ5R372 815 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 C6orf118Q5T5N4 469 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 LRRC8BQ6P9F7 803 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 OR52K2Q8NGK3 314 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 OSCP1Q8WVF1 389 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 TLCD1Q96CP7 247 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 NELL2Q99435 816 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 RETREG1Q9H6L5 497 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 PLAC1Q9HBJ0 212 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 GTSE1Q9NYZ3 720 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 BCCIPQ9P287 314 aaKnown RBP eCLIP17.75■□□□□ 0.43
SRSF1-201ENST00000258962 CFAP97Q9P2B7 532 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 SIT1Q9Y3P8 196 aa17.75■□□□□ 0.43
SRSF1-201ENST00000258962 GFRA2O00451 464 aa17.74■□□□□ 0.43
SRSF1-201ENST00000258962 SLC9A3R1O14745 358 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms