RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 MAP3K20Q9NYL2 800 aaKnown RBP20.72■□□□□ 0.91
RARA-201ENST00000254066 KLHL3Q9UH77 587 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 PCDHA10Q9Y5I2 948 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 C1orf232A0A0U1RR37 186 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.72■□□□□ 0.91
RARA-201ENST00000254066 CLDN25C9JDP6 229 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 NDUFB5O43674 189 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 LIMK2P53671 638 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 SOX10P56693 466 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 ATP6V0D1P61421 351 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 FXNQ16595 210 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 ZYG11AQ6WRX3 759 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 ZC3H7AQ8IWR0 971 aaKnown RBP20.72■□□□□ 0.91
RARA-201ENST00000254066 PLD6Q8N2A8 252 aaKnown RBP20.72■□□□□ 0.91
RARA-201ENST00000254066 OR2T34Q8NGX1 318 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 OR2T3Q8NH03 318 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 NRBF2Q96F24 287 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 RMDN3Q96TC7 470 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 CCM2LQ9NUG4 571 aaPredicted RBP20.72■□□□□ 0.91
RARA-201ENST00000254066 COL20A1Q9P218 1284 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 TRPC5OSA6NMA1 111 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 CABYRO75952 493 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 STBD1O95210 358 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 GNAO1P09471 354 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 GRIA1P42261 906 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 NR2C2P49116 596 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 JAG1P78504 1218 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 FRG1Q14331 258 aaKnown RBP20.71■□□□□ 0.91
RARA-201ENST00000254066 SPANXN3Q5MJ09 141 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 PCDH19Q8TAB3 1148 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 ARNTL2Q8WYA1 636 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 SLC45A3Q96JT2 553 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 ADPGKQ9BRR6 497 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 POLR3FQ9H1D9 316 aaPredicted RBP20.71■□□□□ 0.91
RARA-201ENST00000254066 HMG20AQ9NP66 347 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 VTA1Q9NP79 307 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 PKD2L2Q9NZM6 624 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 SLC17A6Q9P2U8 582 aa20.71■□□□□ 0.91
RARA-201ENST00000254066 RSL1D1O76021 490 aaKnown RBP20.7■□□□□ 0.91
RARA-201ENST00000254066 SEC14L2O76054 403 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 PIGNO95427 931 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 CHRNGP07510 517 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 GNA12Q03113 381 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 ARL13BQ3SXY8 428 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 ZNF618Q5T7W0 954 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 NXNQ6DKJ4 435 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 FAM45BPQ6NSW5 357 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 MAMSTRQ6ZN01 415 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 TRMT1LQ7Z2T5 733 aaKnown RBP20.7■□□□□ 0.91
RARA-201ENST00000254066 DHFR2Q86XF0 187 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 BRSK2Q8IWQ3 736 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 ANKRD52Q8NB46 1076 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 FAM45AQ8TCE6 357 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 NAA50Q9GZZ1 169 aaKnown RBP20.7■□□□□ 0.91
RARA-201ENST00000254066 GPRC5DQ9NZD1 345 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 IFT52Q9Y366 437 aa20.7■□□□□ 0.91
RARA-201ENST00000254066 ITGBL1O95965 494 aaPredicted RBP20.7■□□□□ 0.9
RARA-201ENST00000254066 POLBP06746 335 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 RPL10P27635 214 aaKnown RBP20.7■□□□□ 0.9
RARA-201ENST00000254066 MYL6P60660 151 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 DGKDQ16760 1214 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 ARL13AQ5H913 290 aaPredicted RBP20.7■□□□□ 0.9
RARA-201ENST00000254066 CADM3Q8N126 398 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 CBR4Q8N4T8 237 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 SLC43A3Q8NBI5 491 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 AGR3Q8TD06 166 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 CERS2Q96G23 380 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 WNK4Q96J92 1243 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 TMEM181Q9P2C4 612 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 ANKMY1Q9P2S6 941 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 FEM1BQ9UK73 627 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
RARA-201ENST00000254066 SIP14410 1827 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 A0A096LPK6 155 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 PRORSD1PA6NEY8 169 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 AQP12BA6NM10 295 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 CLOCKO15516 846 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 TIPRLO75663 272 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 DNAJB1P25685 340 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 KIZQ2M2Z5 673 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 C6orf10Q5SRN2 563 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 TMEM198Q66K66 360 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 AQP12AQ8IXF9 295 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 PELI3Q8N2H9 469 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 QKIQ96PU8 341 aaKnown RBP eCLIP20.69■□□□□ 0.9
RARA-201ENST00000254066 TRIM15Q9C019 465 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 CACNA2D2Q9NY47 1150 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 ANKRD6Q9Y2G4 727 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 CROCCQ5TZA2 2017 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 C2CD4BA6NLJ0 364 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 HADHAP40939 763 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 APLP1P51693 650 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 ATP6AP1Q15904 470 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 GLRA4Q5JXX5 417 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 TMEM214Q6NUQ4 689 aaKnown RBP20.69■□□□□ 0.9
RARA-201ENST00000254066 SPRED1Q7Z699 444 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 CMC1Q7Z7K0 106 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 SNX31Q8N9S9 440 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 ADAM32Q8TC27 787 aa20.69■□□□□ 0.9
RARA-201ENST00000254066 MAGED4Q96JG8 741 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms