RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 THOP1P52888 689 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 PDAP1Q13442 181 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 CXCL17Q6UXB2 119 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 SMG8Q8ND04 991 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 ACTRT2Q8TDY3 377 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 DQX1Q8TE96 717 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 PARK7Q99497 189 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 C1orf21Q9H246 121 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 Q9H521 79 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 BCAP29Q9UHQ4 241 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 AAR2Q9Y312 384 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 TTC24A2A3L6 582 aaPredicted RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 RGSL1A5PLK6 1076 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 SUPT7LO94864 414 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 CSPG5O95196 566 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 OR4Q2P0C623 313 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 XRCC1P18887 633 aaPredicted RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 SCNN1AP37088 669 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 TUBB3Q13509 450 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 PTK2BQ14289 1009 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 GK5Q6ZS86 529 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 SH3GL3Q99963 347 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 MRPL1Q9BYD6 325 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 SUDS3Q9H7L9 328 aaPredicted RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 EFCAB1Q9HAE3 211 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 EPS15L1Q9UBC2 864 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 TSR3Q9UJK0 312 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 G3V2L1 256 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 I6L893 689 aaPredicted RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 CRCPO75575 148 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 ANXA9O76027 345 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 APOA4P06727 396 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 VCLP18206 1134 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 GSTT1P30711 240 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 CD151P48509 253 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 CSE1LP55060 971 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 TAS2R39P59534 338 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 PDK3Q15120 406 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 RPS6KA2Q15349 733 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 AGKQ53H12 422 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 FAM91A1Q658Y4 838 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 LRRC8EQ6NSJ5 796 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 KLC3Q6P597 504 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 AAGABQ6PD74 315 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 EPGNQ6UW88 154 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 MIB1Q86YT6 1006 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 KLHL5Q96PQ7 755 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 TRPC7Q9HCX4 862 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 CASS4Q9NQ75 786 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 FAM105AQ9NUU6 356 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 TMEM30AQ9NV96 361 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 OXSMQ9NWU1 459 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 NCKIPSDQ9NZQ3 722 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 ANKRD12Q6UB98 2062 aa12.78□□□□□ -0.36
RAB3IP-201ENST00000247833 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 FYNP06241 537 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 CASP2P42575 452 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 CPT1AP50416 773 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 TSPY1Q01534 308 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 FOLH1Q04609 750 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 NRF1Q16656 503 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 ZC3HC1Q86WB0 502 aaKnown RBP12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 SPATA2LQ8IUW3 424 aaPredicted RBP12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 EME1Q96AY2 570 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 WDR6Q9NNW5 1121 aaKnown RBP12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 CLIC5Q9NZA1 410 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 CRYL1Q9Y2S2 319 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 MGAMO43451 1857 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 LCTP09848 1927 aa12.77□□□□□ -0.36
RAB3IP-201ENST00000247833 PEX1O43933 1283 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 JUNP05412 331 aaKnown RBP12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 NELFEP18615 380 aaKnown RBP12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 PMLP29590 882 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 CRYBB1P53674 252 aaPredicted RBP12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 RAB10P61026 200 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 DBN1Q16643 649 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 PCID2Q5JVF3 399 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 UBXN11Q5T124 520 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 NEPROQ6NW34 567 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 GTF3C2Q8WUA4 911 aaPredicted RBP12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 RTKNQ9BST9 563 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 SP110Q9HB58 689 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 TPST1O60507 370 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 PAGE1O75459 146 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 F2P00734 622 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 PIRTP0C851 137 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 UQCRBP14927 111 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 ARSAP15289 507 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 KCNE1P15382 129 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 PPARGP37231 505 aaPredicted RBP12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 GSTA3Q16772 222 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 TIGD5Q53EQ6 642 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 STXBP5Q5T5C0 1151 aa12.77□□□□□ -0.37
RAB3IP-201ENST00000247833 OR52E8Q6IFG1 317 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms