RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 MCF2LO15068 1137 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 CCP110O43303 1012 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 PLRG1O43660 514 aaKnown RBP16.5■□□□□ 0.23
CLPP-201ENST00000245816 ADH1BP00325 375 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 OR1E1P30953 314 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 ETFBP38117 255 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 SFSWAPQ12872 951 aaKnown RBP16.5■□□□□ 0.23
CLPP-201ENST00000245816 HNRNPDQ14103 355 aaKnown RBP16.5■□□□□ 0.23
CLPP-201ENST00000245816 PIP5KL1Q5T9C9 394 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
CLPP-201ENST00000245816 KANSL1Q7Z3B3 1105 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 PIP4K2CQ8TBX8 421 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 C2orf49Q9BVC5 232 aaPredicted RBP16.5■□□□□ 0.23
CLPP-201ENST00000245816 DONSONQ9NYP3 566 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 CNOT8Q9UFF9 292 aaKnown RBP16.5■□□□□ 0.23
CLPP-201ENST00000245816 VPS28Q9UK41 221 aa16.5■□□□□ 0.23
CLPP-201ENST00000245816 SSU72P8A0A1W2PR75 194 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 PCDHGA12O60330 932 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 SRGAP2O75044 1071 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 TRIM16O95361 564 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 RHOCP08134 193 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
CLPP-201ENST00000245816 RHOQP17081 205 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 MAT2AP31153 395 aaKnown RBP16.49■□□□□ 0.23
CLPP-201ENST00000245816 MAPKAPK2P49137 400 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 CLDN6P56747 220 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 ARF5P84085 180 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 SLC20A2Q08357 652 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 BNIP3Q12983 259 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 TSR1Q2NL82 804 aaKnown RBP16.49■□□□□ 0.23
CLPP-201ENST00000245816 ACCSLQ4AC99 568 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 EFHC2Q5JST6 749 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 PSTKQ8IV42 348 aaKnown RBP16.49■□□□□ 0.23
CLPP-201ENST00000245816 DCAF4L2Q8NA75 395 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 ANP32BQ92688 251 aaKnown RBP16.49■□□□□ 0.23
CLPP-201ENST00000245816 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.49■□□□□ 0.23
CLPP-201ENST00000245816 TMEM248Q9NWD8 314 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 ZNHIT6Q9NWK9 470 aaKnown RBP16.49■□□□□ 0.23
CLPP-201ENST00000245816 SLC25A13Q9UJS0 675 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 PCDHB9Q9Y5E1 797 aa16.49■□□□□ 0.23
CLPP-201ENST00000245816 CHD5Q8TDI0 1954 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3DA0A087WVF3 549 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3IA0A087WXS9 549 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3EA0A087X179 549 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3KA0A087X1G2 549 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3FA6NER0 549 aaPredicted RBP16.48■□□□□ 0.23
CLPP-201ENST00000245816 LRRC72A6NJI9 287 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3LB9A6J9 549 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 FLRT2O43155 660 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 RNF8O76064 485 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3HP0C7X1 549 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 CD38P28907 300 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 CLCN6P51797 869 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 ZNF135P52742 658 aaPredicted RBP16.48■□□□□ 0.23
CLPP-201ENST00000245816 NXPH1P58417 271 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
CLPP-201ENST00000245816 TEAD4Q15561 434 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3GQ6DHY5 549 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3CQ6IPX1 549 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 ALKBH5Q6P6C2 394 aaKnown RBP16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D3Q8IZP1 549 aaPredicted RBP16.48■□□□□ 0.23
CLPP-201ENST00000245816 CCDC185Q8N715 623 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 SAP25Q8TEE9 199 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 ZNF653Q96CK0 615 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TBC1D31Q96DN5 1066 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 ELF4Q99607 663 aaPredicted RBP16.48■□□□□ 0.23
CLPP-201ENST00000245816 MUC3BQ9H195 1237 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 TNKS2Q9H2K2 1166 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 FZD10Q9ULW2 581 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 ZFR2Q9UPR6 939 aaKnown RBP16.48■□□□□ 0.23
CLPP-201ENST00000245816 WASF2Q9Y6W5 498 aa16.48■□□□□ 0.23
CLPP-201ENST00000245816 A0A087X0T9 212 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 GOLGA8CPA6NN73 597 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 BNIP3LO60238 219 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 LRIG2O94898 1065 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 FAM228BP0C875 321 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 PSMA2P25787 234 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 CDC25BP30305 580 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 ACVRL1P37023 503 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 OGDHQ02218 1023 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 CAMK2BQ13554 666 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 SCYL2Q6P3W7 929 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 TMPRSS7Q7RTY8 843 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 NLRP14Q86W24 1093 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 CNGA4Q8IV77 575 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 ZCCHC14Q8WYQ9 949 aaKnown RBP16.47■□□□□ 0.23
CLPP-201ENST00000245816 OR8D1Q8WZ84 308 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 KLK6Q92876 244 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 SERAC1Q96JX3 654 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 ACE2Q9BYF1 805 aaPredicted RBP16.47■□□□□ 0.23
CLPP-201ENST00000245816 MAGEH1Q9H213 219 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 LCMT1Q9UIC8 334 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 NENFQ9UMX5 172 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 APC2O95996 2303 aa16.47■□□□□ 0.23
CLPP-201ENST00000245816 WASH4PA8MWX3 477 aa16.46■□□□□ 0.23
CLPP-201ENST00000245816 TLR4O00206 839 aa16.46■□□□□ 0.23
CLPP-201ENST00000245816 ALOX15BO15296 676 aa16.46■□□□□ 0.23
CLPP-201ENST00000245816 CYP1A2P05177 515 aa16.46■□□□□ 0.23
CLPP-201ENST00000245816 CHRNA3P32297 505 aa16.46■□□□□ 0.23
CLPP-201ENST00000245816 PCK1P35558 622 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms