RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CIR1Q86X95 450 aaPredicted RBP9.28□□□□□ -0.92
SYDE2-201ENST00000234668 ARHGAP12Q8IWW6 846 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 ATPAF2Q8N5M1 289 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 EXT2Q93063 718 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 RCN3Q96D15 328 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 HDAC11Q96DB2 347 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 CMTM5Q96DZ9 223 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 TMA16Q96EY4 203 aaKnown RBP9.28□□□□□ -0.92
SYDE2-201ENST00000234668 SMARCD1Q96GM5 515 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 B3GALT6Q96L58 329 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 TNFRSF12AQ9NP84 129 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 OXSMQ9NWU1 459 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 ABI2Q9NYB9 513 aaPredicted RBP9.28□□□□□ -0.92
SYDE2-201ENST00000234668 GTSE1Q9NYZ3 720 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 SCOCQ9UIL1 159 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 PCDHGB4Q9UN71 923 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 PCDHGB5Q9Y5G0 923 aa9.28□□□□□ -0.92
SYDE2-201ENST00000234668 ATP6AP2A0A1C7CYW4 349 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 GRID2O43424 1007 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 ATP6AP2O75787 350 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 ARNTP27540 789 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 SLC1A2P43004 574 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 ARPP19P56211 112 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 MRPS35P82673 323 aaKnown RBP9.27□□□□□ -0.93
SYDE2-201ENST00000234668 UPP1Q16831 310 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 INSCQ1MX18 579 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 LAYNQ6UX15 382 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 SDCCAG8Q86SQ7 713 aaPredicted RBP9.27□□□□□ -0.93
SYDE2-201ENST00000234668 TRPV1Q8NER1 839 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 SPDYE1Q8NFV5 336 aaPredicted RBP9.27□□□□□ -0.93
SYDE2-201ENST00000234668 GDPD5Q8WTR4 605 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 PABPC5Q96DU9 382 aaKnown RBP9.27□□□□□ -0.93
SYDE2-201ENST00000234668 GCNAQ96QF7 691 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 TBL1YQ9BQ87 522 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 FSD1LQ9BXM9 530 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 IL22Q9GZX6 179 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 ZCWPW1Q9H0M4 648 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 OSER1Q9NX31 292 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 PADI3Q9ULW8 664 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 KCTD3Q9Y597 815 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 CDY1Q9Y6F8 540 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 MYOCOSA0A1B0GUC4 107 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 FAM95CA0A1B0GW59 222 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 F8W8V4 182 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 J3KR12 359 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 B4GALT3O60512 393 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 FBXO21O94952 628 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 NME5P56597 212 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 HUNKP57058 714 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 MRPS22P82650 360 aaKnown RBP9.27□□□□□ -0.93
SYDE2-201ENST00000234668 DSG1Q02413 1049 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 PRPSAP1Q14558 356 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 ANO4Q32M45 955 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 RAB41Q5JT25 222 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 MORN1Q5T089 497 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 BTBD8Q5XKL5 378 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 ITPRIPL1Q6GPH6 555 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 OR52E8Q6IFG1 317 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 DENND5AQ6IQ26 1287 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 IRGCQ6NXR0 463 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 CLEC14AQ86T13 490 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 LSMEM2Q8N112 164 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 RYBPQ8N488 228 aaPredicted RBP9.27□□□□□ -0.93
SYDE2-201ENST00000234668 PCDH20Q8N6Y1 951 aaKnown RBP9.27□□□□□ -0.93
SYDE2-201ENST00000234668 NTAN1Q96AB6 310 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 SLC45A3Q96JT2 553 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 C1QTNF1Q9BXJ1 281 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 DNAI2Q9GZS0 605 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 NT5MQ9NPB1 228 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 DNAJC28Q9NX36 388 aa9.27□□□□□ -0.93
SYDE2-201ENST00000234668 CAPN8A6NHC0 703 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 C9JVG2 144 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 MAFKO60675 156 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 CNTN5O94779 1100 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 SLC4A1P02730 911 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 LYNP07948 512 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 XRCC1P18887 633 aaPredicted RBP9.26□□□□□ -0.93
SYDE2-201ENST00000234668 CTGFP29279 349 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 GRK4P32298 578 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 SOX11P35716 441 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 DPP6P42658 865 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 NPY2RP49146 381 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 RPL14P50914 215 aaKnown RBP9.26□□□□□ -0.93
SYDE2-201ENST00000234668 PAPOLAP51003 745 aaKnown RBP9.26□□□□□ -0.93
SYDE2-201ENST00000234668 MS4A2Q01362 244 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 IHHQ14623 411 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 PPP1R3AQ16821 1122 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 STXBP5Q5T5C0 1151 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 SEL1L3Q68CR1 1132 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 NAPEPLDQ6IQ20 393 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 PKN3Q6P5Z2 889 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 MIB1Q86YT6 1006 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 TTC9BQ8N6N2 239 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 C2orf69Q8N8R5 385 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 OR6Y1Q8NGX8 325 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 OR6P1Q8NGX9 317 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
SYDE2-201ENST00000234668 HEXDCQ8WVB3 486 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 GATA6Q92908 595 aa9.26□□□□□ -0.93
SYDE2-201ENST00000234668 TSNARE1Q96NA8 513 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms