RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 BACE1P56817 501 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 DDX39BQ13838 428 aaKnown RBP13.96□□□□□ -0.17
HCFC2-201ENST00000229330 CARTPTQ16568 116 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 ECM1Q16610 540 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 CCL15Q16663 113 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 FNBP1LQ5T0N5 605 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 CASP12Q6UXS9 341 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 TMEM132CQ8N3T6 1108 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 OR2T34Q8NGX1 318 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 OR2T3Q8NH03 318 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 METTL6Q8TCB7 284 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 TPD52L3Q96J77 140 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 MAP3K20Q9NYL2 800 aaKnown RBP13.96□□□□□ -0.17
HCFC2-201ENST00000229330 HBP1O60381 514 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 FAM155BO75949 473 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 STAG3L1P0CL83 205 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 CHI3L1P36222 383 aaPredicted RBP13.96□□□□□ -0.17
HCFC2-201ENST00000229330 PSTKQ8IV42 348 aaKnown RBP13.96□□□□□ -0.17
HCFC2-201ENST00000229330 PARP8Q8N3A8 854 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 BANPQ8N9N5 519 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 IL22Q9GZX6 179 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 KLHL31Q9H511 634 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 RWDD3Q9Y3V2 267 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 H0YGN5 161 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 CST1P01037 141 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 LTA4HP09960 611 aaKnown RBP13.96□□□□□ -0.17
HCFC2-201ENST00000229330 TYSND1Q2T9J0 566 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 ELMSAN1Q6PJG2 1045 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 RBM12BQ8IXT5 1001 aaKnown RBP13.96□□□□□ -0.17
HCFC2-201ENST00000229330 GTF3C2Q8WUA4 911 aaPredicted RBP13.96□□□□□ -0.17
HCFC2-201ENST00000229330 KCTD4Q8WVF5 259 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 FAR1Q8WVX9 515 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 LPGAT1Q92604 370 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 TMEM59LQ9UK28 342 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 GMEB1Q9Y692 573 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 NFS1Q9Y697 457 aa13.96□□□□□ -0.17
HCFC2-201ENST00000229330 SAGE2PA6NJ88 616 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 SMIM22K7EJ46 135 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 GRIN3BO60391 1043 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 SLC16A1P53985 500 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 TPTEP56180 551 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 RFX4Q33E94 735 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 GK5Q6ZS86 529 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 QKIQ96PU8 341 aaKnown RBP eCLIP13.96□□□□□ -0.18
HCFC2-201ENST00000229330 TBL1YQ9BQ87 522 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 FGFBP2Q9BYJ0 223 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 MTFR1LQ9H019 292 aa13.96□□□□□ -0.18
HCFC2-201ENST00000229330 DDX4Q9NQI0 724 aaKnown RBP13.96□□□□□ -0.18
HCFC2-201ENST00000229330 RBM22Q9NW64 420 aaKnown RBP eCLIP13.96□□□□□ -0.18
HCFC2-201ENST00000229330 UBQLN1Q9UMX0 589 aaKnown RBP13.96□□□□□ -0.18
HCFC2-201ENST00000229330 FAM220BPB1ANY3 271 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 NRP2O60462 931 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CABYRO75952 493 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 GUCA1CO95843 209 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 SLC6A3Q01959 620 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CYP1B1Q16678 543 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 INSCQ1MX18 579 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ZNF284Q2VY69 593 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 PHF12Q96QT6 1004 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 SMAD5Q99717 465 aaKnown RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ADPRHL2Q9NX46 363 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ACO1P21399 889 aaKnown RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 SEPHS1P49903 392 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ZNF157P51786 506 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 NDST1P52848 882 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ALDH6A1Q02252 535 aaKnown RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 HIPK1Q86Z02 1210 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 HSPBAP1Q96EW2 488 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 LENG8Q96PV6 779 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 HOPXQ9BPY8 73 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ZNF624Q9P2J8 865 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CRLS1Q9UJA2 301 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ZBTB24O43167 697 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 LTFP02788 710 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CNPP09543 421 aaKnown RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 TSPAN19P0C672 248 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 MAGP20916 626 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 TCF7P36402 384 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 HYIQ5T013 277 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 OMDQ99983 421 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 MRPL57Q9BQC6 102 aaKnown RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 PRRG3Q9BZD7 231 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CYP3A7-CYP3A51PA0A087WV96 503 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CCNT2O60583 730 aaKnown RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CETPP11597 493 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CYP3A7P24462 503 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ZNF143P52747 638 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 GTF2BQ00403 316 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 THAP5Q7Z6K1 395 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 BTN2A2Q8WVV5 523 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 LRTOMTQ8WZ04 291 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CPT1BQ92523 772 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ELOVL6Q9H5J4 265 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 SMPD3Q9NY59 655 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 PPM1HQ9ULR3 514 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ING4Q9UNL4 249 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CYP3A4P08684 503 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms