RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TLR4O00206 839 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 BUB1O43683 1085 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 PCDH8O95206 1070 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 C1QTNF9P0C862 333 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 PRLRP16471 622 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 PRKCIP41743 596 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 STAT4Q14765 748 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 TDRD12Q587J7 1177 aaKnown RBP14.49□□□□□ -0.09
GPN3-201ENST00000228827 GATAD2AQ86YP4 633 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 CPLX3Q8WVH0 158 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 ZNF653Q96CK0 615 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 ELF4Q99607 663 aaPredicted RBP14.49□□□□□ -0.09
GPN3-201ENST00000228827 EDEM3Q9BZQ6 932 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 KLC2Q9H0B6 622 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 NOL6Q9H6R4 1146 aaKnown RBP14.49□□□□□ -0.09
GPN3-201ENST00000228827 FZD3Q9NPG1 666 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 GDF3Q9NR23 364 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 AP4E1Q9UPM8 1137 aa14.49□□□□□ -0.09
GPN3-201ENST00000228827 A0A1B0GTQ1 180 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 RASA4BC9J798 803 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 SLC31A1O15431 190 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 RASA4O43374 803 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 KDELR3O43731 214 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 AIF1P55008 147 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 GEMIN4P57678 1058 aaKnown RBP14.48□□□□□ -0.09
GPN3-201ENST00000228827 NXPH1P58417 271 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 CCDC15Q0P6D6 951 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 CA9Q16790 459 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 ST3GAL2Q16842 350 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 ZSCAN23Q3MJ62 389 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 SETMARQ53H47 684 aaPredicted RBP14.48□□□□□ -0.09
GPN3-201ENST00000228827 ATXN7L2Q5T6C5 722 aaPredicted RBP14.48□□□□□ -0.09
GPN3-201ENST00000228827 DBX2Q6ZNG2 339 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 SLCO6A1Q86UG4 719 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 HMCESQ96FZ2 354 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
GPN3-201ENST00000228827 HDAC8Q9BY41 377 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 DHX35Q9H5Z1 703 aaKnown RBP14.48□□□□□ -0.09
GPN3-201ENST00000228827 CATSPERBQ9H7T0 1116 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 DMTF1Q9Y222 760 aa14.48□□□□□ -0.09
GPN3-201ENST00000228827 NYNRINQ9P2P1 1898 aaKnown RBP14.47□□□□□ -0.09
GPN3-201ENST00000228827 TMEM191CA6NGB0 347 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 KRIT1O00522 736 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 TRIM16O95361 564 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 GZMAP12544 262 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 ITGB7P26010 798 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 PBX1P40424 430 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 GRK6P43250 576 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 NEK3P51956 506 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 TPI1P60174 286 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 SHBQ15464 509 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 FIGNQ5HY92 759 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 SEL1L3Q68CR1 1132 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 FBXL19Q6PCT2 694 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 PARS2Q7L3T8 475 aaKnown RBP14.47□□□□□ -0.09
GPN3-201ENST00000228827 HORMAD1Q86X24 394 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 SPATS2Q86XZ4 545 aaKnown RBP14.47□□□□□ -0.09
GPN3-201ENST00000228827 ARFGAP1Q8N6T3 406 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 BAHD1Q8TBE0 780 aaPredicted RBP14.47□□□□□ -0.09
GPN3-201ENST00000228827 ISG20Q96AZ6 181 aaKnown RBP14.47□□□□□ -0.09
GPN3-201ENST00000228827 CELF6Q96J87 481 aaKnown RBP14.47□□□□□ -0.09
GPN3-201ENST00000228827 PEBP4Q96S96 227 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 IFNKQ9P0W0 207 aa14.47□□□□□ -0.09
GPN3-201ENST00000228827 ZFR2Q9UPR6 939 aaKnown RBP14.47□□□□□ -0.09
GPN3-201ENST00000228827 PRAMEF26H0Y7S4 382 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 PCDHGA12O60330 932 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 DFNA5O60443 496 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 RNF8O76064 485 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 TMCC1O94876 653 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 GSRP00390 522 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 ITGAVP06756 1048 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 ATXN1LP0C7T5 689 aaKnown RBP14.46□□□□□ -0.09
GPN3-201ENST00000228827 ADRB3P13945 408 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 PTMSP20962 102 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 NUDT1P36639 197 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 SNRPD1P62314 119 aaKnown RBP14.46□□□□□ -0.09
GPN3-201ENST00000228827 ZNF284Q2VY69 593 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 CCDC157Q569K6 752 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 ERMARDQ5T6L9 678 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 HGSNATQ68CP4 663 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 NEK5Q6P3R8 708 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 UNQ6494/PRO21346Q6UXR6 183 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 RAB44Q7Z6P3 723 aaPredicted RBP14.46□□□□□ -0.09
GPN3-201ENST00000228827 GLRX5Q86SX6 157 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 MFSD2AQ8NA29 543 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 OR2AP1Q8NGE2 309 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 KCTD15Q96SI1 283 aaPredicted RBP14.46□□□□□ -0.09
GPN3-201ENST00000228827 CDC6Q99741 560 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 SNRNP25Q9BV90 132 aaKnown RBP14.46□□□□□ -0.09
GPN3-201ENST00000228827 APOBEC2Q9Y235 224 aaKnown RBP14.46□□□□□ -0.09
GPN3-201ENST00000228827 NEUROG3Q9Y4Z2 214 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 SCINQ9Y6U3 715 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 PLXNA2O75051 1894 aa14.46□□□□□ -0.09
GPN3-201ENST00000228827 ASCC3Q8N3C0 2202 aaKnown RBP14.46□□□□□ -0.09
GPN3-201ENST00000228827 PI4KAP42356 2102 aa14.45□□□□□ -0.1
GPN3-201ENST00000228827 CXorf51AA0A1B0GTR3 108 aa14.45□□□□□ -0.1
GPN3-201ENST00000228827 A0A1W2PQJ5 194 aa14.45□□□□□ -0.1
GPN3-201ENST00000228827 ZSCAN5CA6NGD5 496 aaPredicted RBP14.45□□□□□ -0.1
GPN3-201ENST00000228827 WASH4PA8MWX3 477 aa14.45□□□□□ -0.1
GPN3-201ENST00000228827 EEF2KO00418 725 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms