RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 THAP10Q9P2Z0 257 aaPredicted RBP14.27□□□□□ -0.13
SEC61B-201ENST00000223641 LHX3Q9UBR4 397 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 F5P12259 2224 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 MAN2B1O00754 1011 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 NPC1O15118 1278 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 METTL18O95568 372 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 ACTN2P35609 894 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 RGRP47804 291 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 CSNK1DP48730 415 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 PRKCQQ04759 706 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 ZNF235Q14590 738 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 PON2Q15165 354 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 E2F5Q15329 346 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 TRIP13Q15645 432 aaPredicted RBP14.26□□□□□ -0.13
SEC61B-201ENST00000223641 DGKKQ5KSL6 1271 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 ITPRIPL1Q6GPH6 555 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 GJD3Q8N144 294 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 ZNF687Q8N1G0 1237 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 PCDH20Q8N6Y1 951 aaKnown RBP14.26□□□□□ -0.13
SEC61B-201ENST00000223641 UCMAQ8WVF2 138 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 VOPP1Q96AW1 172 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 IMP4Q96G21 291 aaKnown RBP14.26□□□□□ -0.13
SEC61B-201ENST00000223641 GORASP1Q9BQQ3 440 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 CINPQ9BW66 212 aaPredicted RBP14.26□□□□□ -0.13
SEC61B-201ENST00000223641 POLR1EQ9GZS1 481 aaKnown RBP14.26□□□□□ -0.13
SEC61B-201ENST00000223641 RAB17Q9H0T7 212 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 SLC25A51Q9H1U9 297 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 TMEM245Q9H330 911 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 NT5MQ9NPB1 228 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 HAUS2Q9NVX0 235 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 PLA2G4CQ9UP65 541 aa14.26□□□□□ -0.13
SEC61B-201ENST00000223641 FCF1Q9Y324 198 aaKnown RBP14.26□□□□□ -0.13
SEC61B-201ENST00000223641 ANTXRLA6NF34 631 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 TP73O15350 636 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 HEXIM1O94992 359 aaKnown RBP14.25□□□□□ -0.13
SEC61B-201ENST00000223641 EGFP01133 1207 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 MMP2P08253 660 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 NFKB1P19838 968 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 CES1P23141 567 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 FDFT1P37268 417 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 NNMTP40261 264 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 MAGEA6P43360 314 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 STARD6P59095 220 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 SLC7A5Q01650 507 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 NIPAL4Q0D2K0 466 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 GPS1Q13098 491 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 SEMA5AQ13591 1074 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 CCINQ13939 588 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 ZNF234Q14588 700 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 IHHQ14623 411 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 DLG2Q15700 870 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 SLC14A2Q15849 920 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 RALGPS1Q5JS13 557 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 TEX35Q5T0J7 233 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 C22orf39Q6P5X5 142 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 ARHGEF18Q6ZSZ5 1173 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 TPRG1Q6ZUI0 275 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 FAM3CQ92520 227 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 NSMCE3Q96MG7 304 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 ETNK1Q9HBU6 452 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 ARHGEF3Q9NR81 526 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 UTP11Q9Y3A2 253 aaKnown RBP14.25□□□□□ -0.13
SEC61B-201ENST00000223641 TRIOO75962 3097 aa14.25□□□□□ -0.13
SEC61B-201ENST00000223641 ANKRD36A6QL64 1941 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 TARSL2A2RTX5 802 aaKnown RBP14.24□□□□□ -0.13
SEC61B-201ENST00000223641 KRBA1A5PL33 1030 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 DNALI1O14645 258 aaPredicted RBP14.24□□□□□ -0.13
SEC61B-201ENST00000223641 GSRP00390 522 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 PSMB4P28070 264 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 RPL21P46778 160 aaKnown RBP14.24□□□□□ -0.13
SEC61B-201ENST00000223641 MAXP61244 160 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 RHOAP61586 193 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 GRSF1Q12849 480 aaKnown RBP eCLIP14.24□□□□□ -0.13
SEC61B-201ENST00000223641 FBXO43Q4G163 708 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 EMC10Q5UCC4 262 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 EGFLAMQ63HQ2 1017 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 KCTD11Q693B1 232 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 CCDC70Q6NSX1 233 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 PRPF39Q86UA1 669 aaKnown RBP14.24□□□□□ -0.13
SEC61B-201ENST00000223641 OR2AP1Q8NGE2 309 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 UBXN4Q92575 508 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 PTPRN2Q92932 1015 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 LRRC45Q96CN5 670 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 OXNAD1Q96HP4 312 aaPredicted RBP14.24□□□□□ -0.13
SEC61B-201ENST00000223641 PPP1R2P1Q96PQ5 205 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 NUDCD1Q96RS6 583 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 ANKZF1Q9H8Y5 726 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 GDF3Q9NR23 364 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 RAB6BQ9NRW1 208 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 GRHL1Q9NZI5 618 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 WHRNQ9P202 907 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 ASIC3Q9UHC3 531 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 RSPH14Q9UHP6 348 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
SEC61B-201ENST00000223641 CKAP5Q14008 2032 aa14.24□□□□□ -0.13
SEC61B-201ENST00000223641 TTC34A8MYJ7 566 aa14.23□□□□□ -0.13
SEC61B-201ENST00000223641 WASH3PC4AMC7 463 aa14.23□□□□□ -0.13
SEC61B-201ENST00000223641 CTIFO43310 598 aaKnown RBP14.23□□□□□ -0.13
SEC61B-201ENST00000223641 NEBLO76041 1014 aa14.23□□□□□ -0.13
SEC61B-201ENST00000223641 SEC31AO94979 1220 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms