RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 STX16-NPEPL1H3BU86 382 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 XPOTO43592 962 aaKnown RBP17.52■□□□□ 0.4
USB1-201ENST00000219281 SLC35E2BP0CK96 405 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 SMIM18P0DKX4 95 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 CYP2C9P11712 490 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 NCAM1P13591 858 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 HADHAP40939 763 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 DPP6P42658 865 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 ADAM17P78536 824 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 CDH17Q12864 832 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 SLC12A1Q13621 1099 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 ADGRE1Q14246 886 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 ZNF460Q14592 562 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 PDCD2Q16342 344 aaPredicted RBP17.52■□□□□ 0.4
USB1-201ENST00000219281 KIAA0319Q5VV43 1072 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 BHLHE22Q8NFJ8 381 aaPredicted RBP17.52■□□□□ 0.4
USB1-201ENST00000219281 USP33Q8TEY7 942 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 RHOJQ9H4E5 214 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 WDR41Q9HAD4 459 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 DDIT4Q9NX09 232 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 PCDHGB4Q9UN71 923 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 PCDHGB5Q9Y5G0 923 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 ZNF189O75820 626 aaPredicted RBP17.52■□□□□ 0.4
USB1-201ENST00000219281 DDHD2O94830 711 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 CRTAMO95727 393 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 AHSGP02765 367 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 KCNE1P15382 129 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 GABRB3P28472 473 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 HCAR3P49019 387 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 NSUN2Q08J23 767 aaKnown RBP eCLIP17.52■□□□□ 0.4
USB1-201ENST00000219281 GALNT2Q10471 571 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 SCAPQ12770 1279 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 LSAMPQ13449 338 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 ART3Q13508 389 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 RARS2Q5T160 578 aaKnown RBP17.52■□□□□ 0.4
USB1-201ENST00000219281 OTOP3Q7RTS5 596 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 SETD3Q86TU7 594 aaPredicted RBP17.52■□□□□ 0.4
USB1-201ENST00000219281 PGAM4Q8N0Y7 254 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 SPATA6LQ8N4H0 392 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 TOP6BLQ8N6T0 577 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 STYXQ8WUJ0 223 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 TMEM40Q8WWA1 233 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 CELF6Q96J87 481 aaKnown RBP17.52■□□□□ 0.4
USB1-201ENST00000219281 TEKT5Q96M29 485 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 UNKQ9C0B0 810 aaKnown RBP17.52■□□□□ 0.4
USB1-201ENST00000219281 CLIC5Q9NZA1 410 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 VTI1BQ9UEU0 232 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 VPS28Q9UK41 221 aa17.52■□□□□ 0.4
USB1-201ENST00000219281 SMIM35A0A1B0GVV1 85 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 MTSS1O43312 755 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 DLX3O60479 287 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 FAM200BP0CF97 657 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 HK2P52789 917 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 AIF1P55008 147 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 HUNKP57058 714 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 DAOAP59103 153 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 PRPSAP1Q14558 356 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 LRRC8EQ6NSJ5 796 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 GPRIN1Q7Z2K8 1008 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 TLK2Q86UE8 772 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 CENPLQ8N0S6 344 aaPredicted RBP17.51■□□□□ 0.39
USB1-201ENST00000219281 LILRA2Q8N149 483 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 CCNYL1Q8N7R7 359 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 ARRDC4Q8NCT1 418 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 BRD8Q9H0E9 1235 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 Q9H521 79 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 ZBTB26Q9HCK0 441 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 XPR1Q9UBH6 696 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 RIMS3Q9UJD0 308 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 SMIM31A0A1B0GVY4 71 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 SLC22A2O15244 555 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 USP17L7P0C7H9 530 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 PRKAA2P54646 552 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 ARL13BQ3SXY8 428 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 NAPEPLDQ6IQ20 393 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 ZFP1Q6P2D0 407 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 SPATA24Q86W54 205 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 DNAJB3Q8WWF6 145 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 NMD3Q96D46 503 aaKnown RBP17.51■□□□□ 0.39
USB1-201ENST00000219281 CNBD2Q96M20 576 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 NDNQ99608 321 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 NPAS2Q99743 824 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 OMDQ99983 421 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 KIFC1Q9BW19 673 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 NSMCE4AQ9NXX6 385 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 AP4B1Q9Y6B7 739 aa17.51■□□□□ 0.39
USB1-201ENST00000219281 TMEM233B4DJY2 109 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 TARM1B6A8C7 271 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 SLCO1B7G3V0H7 640 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 ME2P23368 584 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 MPP1Q00013 466 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 CTBP1Q13363 440 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 MFSD10Q14728 455 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 XKR4Q5GH76 650 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 INTS6LQ5JSJ4 861 aaKnown RBP17.5■□□□□ 0.39
USB1-201ENST00000219281 UBXN11Q5T124 520 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 CEP97Q8IW35 865 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 DENND6AQ8IWF6 608 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 SPATA22Q8NHS9 363 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 EDEM1Q92611 657 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms