RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 GK5Q6ZS86 529 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 KYQ8NBH2 561 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 EMID1Q96A84 441 aaPredicted RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 TMLHEQ9NVH6 421 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 C9JVG2 144 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 MPOP05164 745 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 THP07101 528 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 MS4A2Q01362 244 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 BTKQ06187 659 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 CYLC2Q14093 348 aaPredicted RBP8.4□□□□□ -1.06
CDC27-201ENST00000066544 PDSS2Q86YH6 399 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 CENPLQ8N0S6 344 aaPredicted RBP8.4□□□□□ -1.06
CDC27-201ENST00000066544 OR6P1Q8NGX9 317 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 TRPV6Q9H1D0 765 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 ST3GAL5Q9UNP4 418 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 SF3B1O75533 1304 aaKnown RBP eCLIP8.4□□□□□ -1.066e-6■■■■■ 80.1
CDC27-201ENST00000066544 MATN2O00339 956 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 DDHD2O94830 711 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 SLC4A1P02730 911 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 SBK3P0C264 359 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 NAB1Q13506 487 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 GK3PQ14409 553 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 KCTD11Q693B1 232 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 ICA1LQ8NDH6 482 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 BHLHE22Q8NFJ8 381 aaPredicted RBP8.4□□□□□ -1.06
CDC27-201ENST00000066544 KLHL5Q96PQ7 755 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 SIKE1Q9BRV8 207 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 BRD8Q9H0E9 1235 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 RHOJQ9H4E5 214 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 CNGB3Q9NQW8 809 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 GTF2IRD1Q9UHL9 959 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 RAP2CQ9Y3L5 183 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 OTOFQ9HC10 1997 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 GRID2O43424 1007 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 CSPG5O95196 566 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 MYL4P12829 197 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 STMN1P16949 149 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 ALDH1A3P47895 512 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 MTTPP55157 894 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 GALNT2Q10471 571 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 CEACAM7Q14002 265 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 LIPMQ5VYY2 423 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 CXCL17Q6UXB2 119 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 BNC2Q6ZN30 1099 aaPredicted RBP8.4□□□□□ -1.06
CDC27-201ENST00000066544 MFSD6LQ8IWD5 586 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 PABPC5Q96DU9 382 aaKnown RBP8.4□□□□□ -1.06
CDC27-201ENST00000066544 LRGUKQ96M69 825 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 AP5M1Q9H0R1 490 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 FAM96AQ9H5X1 160 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 FAM124BQ9H5Z6 455 aaPredicted RBP8.4□□□□□ -1.06
CDC27-201ENST00000066544 CLIC5Q9NZA1 410 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 PDP2Q9P2J9 529 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 ADAM28Q9UKQ2 775 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 CDYLQ9Y232 598 aa8.4□□□□□ -1.06
CDC27-201ENST00000066544 THRAP10827 490 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 FGFR3P22607 806 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 GSTT1P30711 240 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 SLC1A2P43004 574 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 RPL34P49207 117 aaKnown RBP8.4□□□□□ -1.07
CDC27-201ENST00000066544 CDK18Q07002 472 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 SEMA3BQ13214 749 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 CNSTQ6PJW8 725 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 ST13P4Q8IZP2 240 aaPredicted RBP8.4□□□□□ -1.07
CDC27-201ENST00000066544 NMD3Q96D46 503 aaKnown RBP8.4□□□□□ -1.07
CDC27-201ENST00000066544 HDAC11Q96DB2 347 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 CNBD2Q96M20 576 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 SEMA6AQ9H2E6 1030 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 STN1Q9H668 368 aaKnown RBP8.4□□□□□ -1.07
CDC27-201ENST00000066544 WDR41Q9HAD4 459 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 ASB3Q9Y575 518 aa8.4□□□□□ -1.07
CDC27-201ENST00000066544 A0A0G2JMZ2 1700 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 LRRC37A2A6NM11 1700 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 C17orf102A2RUQ5 167 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 PEX1O43933 1283 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 NPY2RP49146 381 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 FOLH1Q04609 750 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 RALGDSQ12967 914 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 PDK3Q15120 406 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 FBXO48Q5FWF7 155 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 LRRC8EQ6NSJ5 796 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 AAGABQ6PD74 315 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 PAOXQ6QHF9 649 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 CYP2R1Q6VVX0 501 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 CLEC14AQ86T13 490 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 MS4A4AQ96JQ5 239 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 GPR22Q99680 433 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 TBL1YQ9BQ87 522 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 SLC39A8Q9C0K1 460 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 PCDHAC1Q9H158 963 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 FAM105AQ9NUU6 356 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 CCDC167Q9P0B6 97 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 A0A1B0GVG6 124 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 MBLAC1A4D2B0 266 aaPredicted RBP8.39□□□□□ -1.07
CDC27-201ENST00000066544 RGSL1A5PLK6 1076 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 KCNU1A8MYU2 1149 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 UQCRBP14927 111 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 KCNA5P22460 613 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 LDLRAD1Q5T700 205 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 FBXL19Q6PCT2 694 aa8.39□□□□□ -1.07
CDC27-201ENST00000066544 PQLC1Q8N2U9 271 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms