RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TRIM42Q8IWZ5 723 aa14.52□□□□□ -0.08
RTFDC1-201ENST00000023939 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.08
RTFDC1-201ENST00000023939 PPHLN1Q8NEY8 458 aaKnown RBP14.52□□□□□ -0.08
RTFDC1-201ENST00000023939 PABPC5Q96DU9 382 aaKnown RBP14.52□□□□□ -0.08
RTFDC1-201ENST00000023939 ZMYND15Q9H091 742 aa14.52□□□□□ -0.08
RTFDC1-201ENST00000023939 RNF38Q9H0F5 515 aa14.52□□□□□ -0.08
RTFDC1-201ENST00000023939 MANSC1Q9H8J5 431 aa14.52□□□□□ -0.08
RTFDC1-201ENST00000023939 SLC17A6Q9P2U8 582 aa14.52□□□□□ -0.08
RTFDC1-201ENST00000023939 ILVBLA1L0T0 632 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 BIRC5O15392 142 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 FGF18O76093 207 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 HOXD9P28356 352 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 ACVRL1P37023 503 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 RNF43Q68DV7 783 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 RFWD3Q6PCD5 774 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 SETD3Q86TU7 594 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 DENND1CQ8IV53 801 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 PGBD5Q8N414 524 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 RAB3IL1Q8TBN0 382 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 SPOCK2Q92563 424 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 CLP1Q92989 425 aaKnown RBP14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 PRICKLE1Q96MT3 831 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 KLHL5Q96PQ7 755 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 C12orf65Q9H3J6 166 aaKnown RBP14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 IL21Q9HBE4 155 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 TREX1Q9NSU2 369 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 C20orf96Q9NUD7 363 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 HAUS2Q9NVX0 235 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 AGO1Q9UL18 857 aaKnown RBP14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 TBC1D30Q9Y2I9 924 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 ZFP37Q9Y6Q3 630 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 CHD5Q8TDI0 1954 aa14.52□□□□□ -0.09
RTFDC1-201ENST00000023939 A0A1B0GVM2 712 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 TCAF2A6NFQ2 919 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 TIMM44O43615 452 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 GLRA3O75311 464 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 EPOP01588 193 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 MSLNQ13421 630 aaPredicted RBP14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 PPIGQ13427 754 aaKnown RBP eCLIP14.51□□□□□ -0.095e-8■□□□□ 11
RTFDC1-201ENST00000023939 RFTN1Q14699 578 aaPredicted RBP14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 HSP90AA5PQ58FG0 334 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 KIAA0930Q6ICG6 404 aaPredicted RBP14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 ZNF783Q6ZMS7 281 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 FAM47EQ6ZV65 393 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 C16orf59Q7L2K0 433 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 STRA8Q7Z7C7 330 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 HERC6Q8IVU3 1022 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 FIBCD1Q8N539 461 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 ZNF398Q8TD17 642 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 AUTS2Q8WXX7 1259 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 ZFRQ96KR1 1074 aaKnown RBP14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 SLCO1B3Q9NPD5 702 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 PCMTD2Q9NV79 361 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 SIRPGQ9P1W8 387 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 DCDC2Q9UHG0 476 aa14.51□□□□□ -0.09
RTFDC1-201ENST00000023939 LOC285095A0A1B0GVY8 99 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 C2orf78A6NCI8 922 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 GFRA2O00451 464 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 TPP1O14773 563 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 KDELR3O43731 214 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 PAPSS2O95340 614 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 ETFBP38117 255 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 CD86P42081 329 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 ARCN1P48444 511 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 POLD2P49005 469 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 SERPINB8P50452 374 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 PDE1BQ01064 536 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 DSC2Q02487 901 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 PDE1CQ14123 709 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 LILRA6Q6PI73 481 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 OTOP2Q7RTS6 562 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 OTOAQ7RTW8 1153 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 TRPM8Q7Z2W7 1104 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 CFAP52Q8N1V2 620 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 ATP2A3Q93084 1043 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 AGAP2Q99490 1192 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 TMEM106CQ9BVX2 250 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 ACE2Q9BYF1 805 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 SLC13A1Q9BZW2 595 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 POLR1EQ9GZS1 481 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 ACTR5Q9H9F9 607 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 ZNF334Q9HCZ1 680 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 GKN1Q9NS71 199 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 KLHL14Q9P2G3 628 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 KIAA1671Q9BY89 1806 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 PTPRSQ13332 1948 aa14.5□□□□□ -0.09
RTFDC1-201ENST00000023939 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 HEATR9A2RTY3 570 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 MYO1CO00159 1063 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 TGDSO95455 350 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 FGBP02675 491 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 GSTA1P08263 222 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 CNPP09543 421 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 PAMP19021 973 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 SERPINH1P50454 418 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 CSRP3P50461 194 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 RPS24P62847 133 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ZNF177Q13360 481 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 IHHQ14623 411 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 POU6F1Q14863 301 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms