RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CCDC14Q49A88 953 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 CARD16Q5EG05 197 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 KIAA1161Q6NSJ0 714 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 OR4C6Q8NH72 309 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 ASB12Q8WXK4 309 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 HEPHQ9BQS7 1158 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 TNKS2Q9H2K2 1166 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 ATP13A1Q9HD20 1204 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 TMEM248Q9NWD8 314 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 NEU3Q9UQ49 428 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 RP1P56715 2156 aa16.19■□□□□ 0.18
ERCC1-201ENST00000013807 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 PES1O00541 588 aaKnown RBP16.18■□□□□ 0.18
ERCC1-201ENST00000013807 TRIM38O00635 465 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 ADRB3P13945 408 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 RHOQP17081 205 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 AKT2P31751 481 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 GEMIN4P57678 1058 aaKnown RBP16.18■□□□□ 0.18
ERCC1-201ENST00000013807 RPS21P63220 83 aaKnown RBP16.18■□□□□ 0.18
ERCC1-201ENST00000013807 ATP11AP98196 1134 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 E2F1Q01094 437 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 KRT31Q15323 416 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 COL28A1Q2UY09 1125 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 CCDC157Q569K6 752 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 GCNT7Q6ZNI0 430 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 PDZD3Q86UT5 571 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 EMC1Q8N766 993 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 SLC20A1Q8WUM9 679 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 RXFP2Q8WXD0 754 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 NTAN1Q96AB6 310 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 NXPE2Q96DL1 559 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 FEM1CQ96JP0 617 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 LENG8Q96PV6 779 aaPredicted RBP16.18■□□□□ 0.18
ERCC1-201ENST00000013807 SPON2Q9BUD6 331 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 SLC17A9Q9BYT1 436 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 MAGEH1Q9H213 219 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 METTL5Q9NRN9 209 aaKnown RBP16.18■□□□□ 0.18
ERCC1-201ENST00000013807 LMBRD1Q9NUN5 540 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 TAB2Q9NYJ8 693 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 CA5BQ9Y2D0 317 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 SIK3Q9Y2K2 1263 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 FADS3Q9Y5Q0 445 aa16.18■□□□□ 0.18
ERCC1-201ENST00000013807 SMG1Q96Q15 3661 aaKnown RBP16.17■□□□□ 0.18
ERCC1-201ENST00000013807 SIGLEC6O43699 453 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 PIAS2O75928 621 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 GFPT2O94808 682 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 PRLRP16471 622 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 SDC4P31431 198 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 CCNHP51946 323 aaPredicted RBP16.17■□□□□ 0.18
ERCC1-201ENST00000013807 HDAC4P56524 1084 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 POLR2FP61218 127 aaKnown RBP16.17■□□□□ 0.18
ERCC1-201ENST00000013807 TARDBPQ13148 414 aaKnown RBP eCLIP16.17■□□□□ 0.18
ERCC1-201ENST00000013807 RAB6CQ53S08 254 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 HES3Q5TGS1 186 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 SEL1L3Q68CR1 1132 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 C19orf48Q6RUI8 117 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 SLC22A18ASQ8N1D0 253 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 DCBLD1Q8N8Z6 715 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 FAM181AQ8N9Y4 354 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 OR13H1Q8NG92 308 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 ARHGEF2Q92974 986 aaKnown RBP16.17■□□□□ 0.18
ERCC1-201ENST00000013807 RAB7BQ96AH8 199 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 BMFQ96LC9 184 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 C1QTNF2Q9BXJ5 285 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 RAB6CQ9H0N0 254 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 NDFIP2Q9NV92 336 aa16.17■□□□□ 0.18
ERCC1-201ENST00000013807 COL27A1Q8IZC6 1860 aaPredicted RBP16.16■□□□□ 0.18
ERCC1-201ENST00000013807 EPHB6O15197 1021 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 LRIG2O94898 1065 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 PCDH8O95206 1070 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 CKMT1AP12532 417 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 KLK7P49862 253 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 INSM1Q01101 510 aaPredicted RBP16.16■□□□□ 0.18
ERCC1-201ENST00000013807 FGL2Q14314 439 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 C15orf59Q2T9L4 293 aaPredicted RBP16.16■□□□□ 0.18
ERCC1-201ENST00000013807 KYAT3Q6YP21 454 aaKnown RBP16.16■□□□□ 0.18
ERCC1-201ENST00000013807 PHF13Q86YI8 300 aaPredicted RBP16.16■□□□□ 0.18
ERCC1-201ENST00000013807 DRC7Q8IY82 874 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 JOSD2Q8TAC2 188 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 GRIN3AQ8TCU5 1115 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 GPT2Q8TD30 523 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 HNRNPLLQ8WVV9 542 aaKnown RBP16.16■□□□□ 0.18
ERCC1-201ENST00000013807 KLK6Q92876 244 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 KLF6Q99612 283 aaPredicted RBP16.16■□□□□ 0.18
ERCC1-201ENST00000013807 VPS16Q9H269 839 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 NLGN3Q9NZ94 848 aa16.16■□□□□ 0.18
ERCC1-201ENST00000013807 SPTY2D1-AS1A0A0U1RR47 76 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 TCRBV5S1A1TA0A578 114 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 NEMP2A6NFY4 417 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 ZSCAN5CA6NGD5 496 aaPredicted RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 SIGLEC16A6NMB1 481 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 A6NNZ2 444 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FAM72CH0Y354 149 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 RIOK3O14730 519 aaKnown RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 SCAMP1O15126 338 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 TSPAN6O43657 245 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 PAK4O96013 591 aaPredicted RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 GSRP00390 522 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 PLEKP08567 350 aaPredicted RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 KRT3P12035 628 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms