RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Pik3cgQ9JHG7 1102 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Stau1Q9Z108 487 aaKnown RBP13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tbc1d16A2ABG4 766 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Cntnap3E9PY62 1287 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gm7073E9QAS1 335 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Rgs4O08899 205 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 PargO88622 969 aaKnown RBP13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 JundP15066 341 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 HmbsP22907 361 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 S100a5P63084 93 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Fads2p1Q0VAX3 487 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mfsd3Q5U419 412 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Crhr2Q60748 411 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Bcl2l1Q64373 233 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gpr142Q7TQN9 365 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 AarsQ8BGQ7 968 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pacs1Q8K212 961 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 HnrnplQ8R081 586 aaKnown RBP13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Eml3Q8VC03 897 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Sugt1Q9CX34 336 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Spint1Q9R097 507 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Rbbp6P97868 1790 aaKnown RBP13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 4930469K13RikA0A286YDB2 92 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Foxm1O08696 760 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Man2b1O09159 1013 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Frg1P97376 258 aaKnown RBP13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Plcl1Q3USB7 1096 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tas2r129Q7M709 320 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Olfr26Q7TRB7 308 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zbtb9Q8CDC7 459 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 WwoxQ91WL8 414 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Olfr933Q9EQA0 308 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Lamb1P02469 1786 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ttll11A4Q9F4 727 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gpr25P0C5I1 358 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Sat1P48026 171 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tead2P48301 445 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 St14P56677 855 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Hexim2Q3TVI4 313 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Nlrp4fQ66X05 959 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Samd7Q8C8Y5 445 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Adam32Q8K410 754 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 KmoQ91WN4 479 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Nxnl2Q9D531 156 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 TfebQ9R210 475 aa13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Togaram1Q6A070 1776 aaKnown RBP13.55□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tubb1A2AQ07 451 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ddx43D3Z6P9 646 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 2210016F16RikG3X8U3 338 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gm7942L7N277 499 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ppef1O35655 650 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Itgb7P26011 806 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Smpd1Q04519 627 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zfp217Q3U0X6 1041 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zfp759Q7M6X3 721 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Fnip2Q80TD3 1108 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Q8CIL4 281 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mta3Q924K8 591 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Lgals2Q9CQW5 130 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pbld2Q9CXN7 288 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Cab39lQ9DB16 337 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gpatch1Q9DBM1 930 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 CrotQ9DC50 612 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Trhr2Q9ERT2 382 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ccr10Q9JL21 362 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Capn15Q9JLG8 1095 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Rnf25Q9QZR0 456 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 FAM186AQ9D9R9 1790 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 TicrrQ8BQ33 1889 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Vmn2r74E9PW21 853 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 IkbkgO88522 412 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 AfpP02772 605 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Vps26aP40336 327 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Msh2P43247 935 aaKnown RBP13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ephb2P54763 986 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pkn1P70268 946 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 GaltQ03249 379 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mtrf1Q8K126 446 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Spag16Q8K450 639 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Znf426Q8R1D1 550 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ttc39cQ8VE09 580 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Snx15Q91WE1 337 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Kctd4Q9D7X1 259 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mzf1S4R1L6 814 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Cdc6O89033 562 aaKnown RBP13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Kif5aP33175 1027 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Aff3P51827 1254 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Emc10Q3TAS6 258 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slfn4Q3UV66 602 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Six1Q62231 284 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ssxb3Q6XAS4 170 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ago1Q8CJG1 857 aaKnown RBP13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Trpd52l3Q9CQ14 231 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 CdylQ9WTK2 593 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Vmn2r17E9PYF5 849 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Cyp2b19O55071 492 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Top3aO70157 1003 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ccdc153P0C7Q1 202 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ap2a1P17426 977 aaKnown RBP13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Hspa4lP48722 838 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms